template prop object
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_NTM http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_NTM http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/ns/prov#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_NTM http://www.w3.org/2000/01/rdf-schema#label AquaFlow_NTM
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_NTM http://www.opmw.org/ontology/hasTemplateDiagram "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/1/Water/ontology/Water/AquaFlow_NTM.owl.png"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_NTM http://www.opmw.org/ontology/createdInWorkflowSystem "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_NTM http://purl.org/dc/elements/1.1/rights "http://creativecommons.org/licenses/by-sa/3.0/"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_NTM http://www.opmw.org/ontology/versionNumber "2"^^<http://www.w3.org/2001/XMLSchema#int>
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_NTM http://purl.org/dc/terms/contributor http://www.opmw.org/export/resource/Agent/WATER
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_NTM http://www.opmw.org/ontology/hasDocumentation
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_NTM http://www.w3.org/ns/prov#wasAttributedTo "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_NTM http://www.w3.org/ns/prov#hadPrimarySource "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/1/Water/ontology/Water/AquaFlow_NTM.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_NTM http://www.opmw.org/ontology/hasNativeSystemTemplate "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/1/Water/ontology/Water/AquaFlow_NTM.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/ns/prov#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDS http://www.w3.org/2000/01/rdf-schema#label SimilarWords
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDS http://www.opmw.org/ontology/hasTemplateDiagram "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/TextAnalytics/ontology/TextAnalytics/SimilarWords.owl.png"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDS http://www.opmw.org/ontology/createdInWorkflowSystem "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDS http://purl.org/dc/elements/1.1/rights "http://creativecommons.org/licenses/by-sa/3.0/"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDS http://www.opmw.org/ontology/versionNumber "2"^^<http://www.w3.org/2001/XMLSchema#int>
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDS http://purl.org/dc/terms/contributor http://www.opmw.org/export/resource/Agent/DANIEL
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDS http://www.opmw.org/ontology/hasDocumentation
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDS http://www.w3.org/ns/prov#wasAttributedTo "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDS http://www.w3.org/ns/prov#hadPrimarySource "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/TextAnalytics/ontology/TextAnalytics/SimilarWords.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDS http://www.opmw.org/ontology/hasNativeSystemTemplate "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/TextAnalytics/ontology/TextAnalytics/SimilarWords.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELTHENNAIVEBAYESCLASSIFY http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/MODELTHENNAIVEBAYESCLASSIFY http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/ns/prov#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/MODELTHENNAIVEBAYESCLASSIFY http://www.w3.org/2000/01/rdf-schema#label ModelThenNaiveBayesClassify
http://www.opmw.org/export/resource/WorkflowTemplate/MODELTHENNAIVEBAYESCLASSIFY http://www.opmw.org/ontology/hasTemplateDiagram "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/DMDomain/ontology/DMDomain/ModelThenNaiveBayesClassify.owl.png"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELTHENNAIVEBAYESCLASSIFY http://www.opmw.org/ontology/createdInWorkflowSystem "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELTHENNAIVEBAYESCLASSIFY http://purl.org/dc/elements/1.1/rights "http://creativecommons.org/licenses/by-sa/3.0/"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELTHENNAIVEBAYESCLASSIFY http://www.opmw.org/ontology/versionNumber "2"^^<http://www.w3.org/2001/XMLSchema#int>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELTHENNAIVEBAYESCLASSIFY http://purl.org/dc/terms/contributor http://www.opmw.org/export/resource/Agent/DANIEL
http://www.opmw.org/export/resource/WorkflowTemplate/MODELTHENNAIVEBAYESCLASSIFY http://www.opmw.org/ontology/hasDocumentation Please see the documentation at <a href="http://seagull.isi.edu/wiki/wings/Weka_Data_Mining_Domain">http://seagull.isi.edu/wiki/wings/Weka_Data_Mining_Domain</a><br><br>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELTHENNAIVEBAYESCLASSIFY http://www.w3.org/ns/prov#wasAttributedTo "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELTHENNAIVEBAYESCLASSIFY http://www.w3.org/ns/prov#hadPrimarySource "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/DMDomain/ontology/DMDomain/ModelThenNaiveBayesClassify.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELTHENNAIVEBAYESCLASSIFY http://www.opmw.org/ontology/hasNativeSystemTemplate "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/DMDomain/ontology/DMDomain/ModelThenNaiveBayesClassify.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/PARENTDT_WORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/PARENTDT_WORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/ns/prov#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/PARENTDT_WORKFLOW http://www.w3.org/2000/01/rdf-schema#label ParenTDT_Workflow
http://www.opmw.org/export/resource/WorkflowTemplate/PARENTDT_WORKFLOW http://www.opmw.org/ontology/hasTemplateDiagram "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/genomics/ontology/genomics/ParenTDT_Workflow.owl.png"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/PARENTDT_WORKFLOW http://www.opmw.org/ontology/createdInWorkflowSystem "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/PARENTDT_WORKFLOW http://purl.org/dc/elements/1.1/rights "http://creativecommons.org/licenses/by-sa/3.0/"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/PARENTDT_WORKFLOW http://www.opmw.org/ontology/versionNumber "2"^^<http://www.w3.org/2001/XMLSchema#int>
http://www.opmw.org/export/resource/WorkflowTemplate/PARENTDT_WORKFLOW http://purl.org/dc/terms/contributor http://www.opmw.org/export/resource/Agent/GIL
http://www.opmw.org/export/resource/WorkflowTemplate/PARENTDT_WORKFLOW http://www.opmw.org/ontology/hasDocumentation <p>This is variant of the basic family-based association testing for disease traits that also incorporates parental phenotype information, the ParenTDT function in PLINK.</p> <i>Input: [PEDFile], [MAPFile]</i><br /> <i>Output: [OutputTDT], [OutputTDTPerm]</i><br /> <br /> <ul> <li><b>CreateBinaryPEDFile:</b> This component converts hapmap format into efficient binary format used by Plink. <ul> <li>plink --file [InputPEDFile] --make-bed --out [OutputBPEDFile]</li> </ul> <br /> </li> <li><b>ParenTDT:</b> This is the same as a basic TDT test except the permutation output is based not on the standard TDT, but the parenTDT. <ul> <li>plink --bed [BPEDFile] --bim [BIMFile] --fam [FAMFile] --parentdt1 --out [OutputTDT]</li> </ul> <br /> </li> </ul>
http://www.opmw.org/export/resource/WorkflowTemplate/PARENTDT_WORKFLOW http://www.w3.org/ns/prov#wasAttributedTo "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/PARENTDT_WORKFLOW http://www.w3.org/ns/prov#hadPrimarySource "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/genomics/ontology/genomics/ParenTDT_Workflow.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/PARENTDT_WORKFLOW http://www.opmw.org/ontology/hasNativeSystemTemplate "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/genomics/ontology/genomics/ParenTDT_Workflow.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/DOCUMENTCLASSIFICATION_MULTI http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/DOCUMENTCLASSIFICATION_MULTI http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/ns/prov#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/DOCUMENTCLASSIFICATION_MULTI http://www.w3.org/2000/01/rdf-schema#label DocumentClassification_multi
http://www.opmw.org/export/resource/WorkflowTemplate/DOCUMENTCLASSIFICATION_MULTI http://www.opmw.org/ontology/hasTemplateDiagram "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/TextAnalytics/ontology/TextAnalytics/DocumentClassification_multi.owl.png"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/DOCUMENTCLASSIFICATION_MULTI http://www.opmw.org/ontology/createdInWorkflowSystem "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/DOCUMENTCLASSIFICATION_MULTI http://purl.org/dc/elements/1.1/rights "http://creativecommons.org/licenses/by-sa/3.0/"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/DOCUMENTCLASSIFICATION_MULTI http://www.opmw.org/ontology/versionNumber "2"^^<http://www.w3.org/2001/XMLSchema#int>
http://www.opmw.org/export/resource/WorkflowTemplate/DOCUMENTCLASSIFICATION_MULTI http://purl.org/dc/terms/contributor http://www.opmw.org/export/resource/Agent/DANIEL
http://www.opmw.org/export/resource/WorkflowTemplate/DOCUMENTCLASSIFICATION_MULTI http://www.opmw.org/ontology/hasDocumentation
http://www.opmw.org/export/resource/WorkflowTemplate/DOCUMENTCLASSIFICATION_MULTI http://www.w3.org/ns/prov#wasAttributedTo "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/DOCUMENTCLASSIFICATION_MULTI http://www.w3.org/ns/prov#hadPrimarySource "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/TextAnalytics/ontology/TextAnalytics/DocumentClassification_multi.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/DOCUMENTCLASSIFICATION_MULTI http://www.opmw.org/ontology/hasNativeSystemTemplate "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/TextAnalytics/ontology/TextAnalytics/DocumentClassification_multi.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/ISWC2010COAUTHORS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/ISWC2010COAUTHORS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/ns/prov#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/ISWC2010COAUTHORS http://www.w3.org/2000/01/rdf-schema#label iswc2010coauthors
http://www.opmw.org/export/resource/WorkflowTemplate/ISWC2010COAUTHORS http://www.opmw.org/ontology/hasTemplateDiagram "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/SocialContentNetworkAnalysis/ontology/SocialContentNetworkAnalysis/iswc2010coauthors.owl.png"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/ISWC2010COAUTHORS http://www.opmw.org/ontology/createdInWorkflowSystem "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/ISWC2010COAUTHORS http://purl.org/dc/elements/1.1/rights "http://creativecommons.org/licenses/by-sa/3.0/"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/ISWC2010COAUTHORS http://www.opmw.org/ontology/versionNumber "2"^^<http://www.w3.org/2001/XMLSchema#int>
http://www.opmw.org/export/resource/WorkflowTemplate/ISWC2010COAUTHORS http://purl.org/dc/terms/contributor http://www.opmw.org/export/resource/Agent/DANIEL
http://www.opmw.org/export/resource/WorkflowTemplate/ISWC2010COAUTHORS http://www.opmw.org/ontology/hasDocumentation
http://www.opmw.org/export/resource/WorkflowTemplate/ISWC2010COAUTHORS http://www.w3.org/ns/prov#wasAttributedTo "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/ISWC2010COAUTHORS http://www.w3.org/ns/prov#hadPrimarySource "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/SocialContentNetworkAnalysis/ontology/SocialContentNetworkAnalysis/iswc2010coauthors.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/ISWC2010COAUTHORS http://www.opmw.org/ontology/hasNativeSystemTemplate "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/SocialContentNetworkAnalysis/ontology/SocialContentNetworkAnalysis/iswc2010coauthors.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_EDM http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_EDM http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/ns/prov#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_EDM http://www.w3.org/2000/01/rdf-schema#label AquaFlow_EDM
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_EDM http://www.opmw.org/ontology/hasTemplateDiagram "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/1/Water/ontology/Water/AquaFlow_EDM.owl.png"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_EDM http://www.opmw.org/ontology/createdInWorkflowSystem "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_EDM http://purl.org/dc/elements/1.1/rights "http://creativecommons.org/licenses/by-sa/3.0/"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_EDM http://www.opmw.org/ontology/versionNumber "2"^^<http://www.w3.org/2001/XMLSchema#int>
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_EDM http://purl.org/dc/terms/contributor http://www.opmw.org/export/resource/Agent/WATER
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_EDM http://www.opmw.org/ontology/hasDocumentation
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_EDM http://www.w3.org/ns/prov#wasAttributedTo "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_EDM http://www.w3.org/ns/prov#hadPrimarySource "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/1/Water/ontology/Water/AquaFlow_EDM.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/AQUAFLOW_EDM http://www.opmw.org/ontology/hasNativeSystemTemplate "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/1/Water/ontology/Water/AquaFlow_EDM.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/FEATUREGENERATION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/FEATUREGENERATION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/ns/prov#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/FEATUREGENERATION http://www.w3.org/2000/01/rdf-schema#label FeatureGeneration
http://www.opmw.org/export/resource/WorkflowTemplate/FEATUREGENERATION http://www.opmw.org/ontology/hasTemplateDiagram "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/TextAnalytics/ontology/TextAnalytics/FeatureGeneration.owl.png"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/FEATUREGENERATION http://www.opmw.org/ontology/createdInWorkflowSystem "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/FEATUREGENERATION http://purl.org/dc/elements/1.1/rights "http://creativecommons.org/licenses/by-sa/3.0/"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/FEATUREGENERATION http://www.opmw.org/ontology/versionNumber "2"^^<http://www.w3.org/2001/XMLSchema#int>
http://www.opmw.org/export/resource/WorkflowTemplate/FEATUREGENERATION http://purl.org/dc/terms/contributor http://www.opmw.org/export/resource/Agent/DANIEL
http://www.opmw.org/export/resource/WorkflowTemplate/FEATUREGENERATION http://www.opmw.org/ontology/hasDocumentation Template for Feature Generation<br>
http://www.opmw.org/export/resource/WorkflowTemplate/FEATUREGENERATION http://www.w3.org/ns/prov#wasAttributedTo "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/FEATUREGENERATION http://www.w3.org/ns/prov#hadPrimarySource "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/TextAnalytics/ontology/TextAnalytics/FeatureGeneration.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/FEATUREGENERATION http://www.opmw.org/ontology/hasNativeSystemTemplate "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/TextAnalytics/ontology/TextAnalytics/FeatureGeneration.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/CORRELATIONSCORE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/CORRELATIONSCORE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/ns/prov#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/CORRELATIONSCORE http://www.w3.org/2000/01/rdf-schema#label CorrelationScore
http://www.opmw.org/export/resource/WorkflowTemplate/CORRELATIONSCORE http://www.opmw.org/ontology/hasTemplateDiagram "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/TextAnalytics/ontology/TextAnalytics/CorrelationScore.owl.png"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/CORRELATIONSCORE http://www.opmw.org/ontology/createdInWorkflowSystem "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/CORRELATIONSCORE http://purl.org/dc/elements/1.1/rights "http://creativecommons.org/licenses/by-sa/3.0/"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/CORRELATIONSCORE http://www.opmw.org/ontology/versionNumber "2"^^<http://www.w3.org/2001/XMLSchema#int>
http://www.opmw.org/export/resource/WorkflowTemplate/CORRELATIONSCORE http://purl.org/dc/terms/contributor http://www.opmw.org/export/resource/Agent/DANIEL
http://www.opmw.org/export/resource/WorkflowTemplate/CORRELATIONSCORE http://www.opmw.org/ontology/hasDocumentation
http://www.opmw.org/export/resource/WorkflowTemplate/CORRELATIONSCORE http://www.w3.org/ns/prov#wasAttributedTo "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/CORRELATIONSCORE http://www.w3.org/ns/prov#hadPrimarySource "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/TextAnalytics/ontology/TextAnalytics/CorrelationScore.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/CORRELATIONSCORE http://www.opmw.org/ontology/hasNativeSystemTemplate "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/TextAnalytics/ontology/TextAnalytics/CorrelationScore.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/DISCRETIZE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/DISCRETIZE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/ns/prov#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/DISCRETIZE http://www.w3.org/2000/01/rdf-schema#label Discretize
http://www.opmw.org/export/resource/WorkflowTemplate/DISCRETIZE http://www.opmw.org/ontology/hasTemplateDiagram "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/DMDomain/ontology/DMDomain/Discretize.owl.png"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/DISCRETIZE http://www.opmw.org/ontology/createdInWorkflowSystem "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/DISCRETIZE http://purl.org/dc/elements/1.1/rights "http://creativecommons.org/licenses/by-sa/3.0/"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/DISCRETIZE http://www.opmw.org/ontology/versionNumber "2"^^<http://www.w3.org/2001/XMLSchema#int>
http://www.opmw.org/export/resource/WorkflowTemplate/DISCRETIZE http://purl.org/dc/terms/contributor http://www.opmw.org/export/resource/Agent/DANIEL
http://www.opmw.org/export/resource/WorkflowTemplate/DISCRETIZE http://www.opmw.org/ontology/hasDocumentation Please see the documentation at <a href="http://seagull.isi.edu/wiki/wings/Weka_Data_Mining_Domain">http://seagull.isi.edu/wiki/wings/Weka_Data_Mining_Domain</a><br><br>
http://www.opmw.org/export/resource/WorkflowTemplate/DISCRETIZE http://www.w3.org/ns/prov#wasAttributedTo "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/DISCRETIZE http://www.w3.org/ns/prov#hadPrimarySource "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/DMDomain/ontology/DMDomain/Discretize.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/DISCRETIZE http://www.opmw.org/ontology/hasNativeSystemTemplate "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/DMDomain/ontology/DMDomain/Discretize.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/RANDOMIZEASPECIFICFILE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/RANDOMIZEASPECIFICFILE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/ns/prov#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/RANDOMIZEASPECIFICFILE http://www.w3.org/2000/01/rdf-schema#label RandomizeASpecificFile
http://www.opmw.org/export/resource/WorkflowTemplate/RANDOMIZEASPECIFICFILE http://www.opmw.org/ontology/hasTemplateDiagram "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/DMDomain/ontology/DMDomain/RandomizeASpecificFile.owl.png"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/RANDOMIZEASPECIFICFILE http://www.opmw.org/ontology/createdInWorkflowSystem "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/RANDOMIZEASPECIFICFILE http://purl.org/dc/elements/1.1/rights "http://creativecommons.org/licenses/by-sa/3.0/"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/RANDOMIZEASPECIFICFILE http://www.opmw.org/ontology/versionNumber "2"^^<http://www.w3.org/2001/XMLSchema#int>
http://www.opmw.org/export/resource/WorkflowTemplate/RANDOMIZEASPECIFICFILE http://purl.org/dc/terms/contributor http://www.opmw.org/export/resource/Agent/DANIEL
http://www.opmw.org/export/resource/WorkflowTemplate/RANDOMIZEASPECIFICFILE http://www.opmw.org/ontology/hasDocumentation Please see the documentation at <a href="http://seagull.isi.edu/wiki/wings/Weka_Data_Mining_Domain">http://seagull.isi.edu/wiki/wings/Weka_Data_Mining_Domain</a><br><br>
http://www.opmw.org/export/resource/WorkflowTemplate/RANDOMIZEASPECIFICFILE http://www.w3.org/ns/prov#wasAttributedTo "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/RANDOMIZEASPECIFICFILE http://www.w3.org/ns/prov#hadPrimarySource "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/DMDomain/ontology/DMDomain/RandomizeASpecificFile.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/RANDOMIZEASPECIFICFILE http://www.opmw.org/ontology/hasNativeSystemTemplate "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/DMDomain/ontology/DMDomain/RandomizeASpecificFile.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDSTOPICS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDSTOPICS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/ns/prov#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDSTOPICS http://www.w3.org/2000/01/rdf-schema#label SimilarWordsTopics
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDSTOPICS http://www.opmw.org/ontology/hasTemplateDiagram "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/TextAnalytics/ontology/TextAnalytics/SimilarWordsTopics.owl.png"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDSTOPICS http://www.opmw.org/ontology/createdInWorkflowSystem "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDSTOPICS http://purl.org/dc/elements/1.1/rights "http://creativecommons.org/licenses/by-sa/3.0/"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDSTOPICS http://www.opmw.org/ontology/versionNumber "2"^^<http://www.w3.org/2001/XMLSchema#int>
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDSTOPICS http://purl.org/dc/terms/contributor http://www.opmw.org/export/resource/Agent/DANIEL
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDSTOPICS http://www.opmw.org/ontology/hasDocumentation
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDSTOPICS http://www.w3.org/ns/prov#wasAttributedTo "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDSTOPICS http://www.w3.org/ns/prov#hadPrimarySource "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/TextAnalytics/ontology/TextAnalytics/SimilarWordsTopics.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/SIMILARWORDSTOPICS http://www.opmw.org/ontology/hasNativeSystemTemplate "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/TextAnalytics/ontology/TextAnalytics/SimilarWordsTopics.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/STRUCTURED_ASSOCIATION_TEST http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/STRUCTURED_ASSOCIATION_TEST http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/ns/prov#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/STRUCTURED_ASSOCIATION_TEST http://www.w3.org/2000/01/rdf-schema#label Structured_Association_Test
http://www.opmw.org/export/resource/WorkflowTemplate/STRUCTURED_ASSOCIATION_TEST http://www.opmw.org/ontology/hasTemplateDiagram "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/genomics/ontology/genomics/Structured_Association_Test.owl.png"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/STRUCTURED_ASSOCIATION_TEST http://www.opmw.org/ontology/createdInWorkflowSystem "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/STRUCTURED_ASSOCIATION_TEST http://purl.org/dc/elements/1.1/rights "http://creativecommons.org/licenses/by-sa/3.0/"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/STRUCTURED_ASSOCIATION_TEST http://www.opmw.org/ontology/versionNumber "2"^^<http://www.w3.org/2001/XMLSchema#int>
http://www.opmw.org/export/resource/WorkflowTemplate/STRUCTURED_ASSOCIATION_TEST http://purl.org/dc/terms/contributor http://www.opmw.org/export/resource/Agent/DANIEL
http://www.opmw.org/export/resource/WorkflowTemplate/STRUCTURED_ASSOCIATION_TEST http://www.opmw.org/ontology/hasDocumentation <p>This workflow converts Pedigree Data to Structure format, and then runs STRUCTURE on it.</p> <i>Input: [PEDFile], [MAPFile]</i><br /> <i>Output: [StructureOutput]</i><br /> <br /> <ul> <li><b>CreateBinaryPEDFile:</b> This component converts hapmap format into efficient binary format used by Plink. <ul> <li>plink --file [InputPEDFile] --make-bed --out [OutputBPEDFile]</li> </ul> <br /> </li> <li><b>Convert_to_Structure_Format:</b> Convert Binary PED data to Structure Input <ul> <li>plink --bed [BPEDFile] --bim [BIMFile] --fam [FAMFile] --recode-structure --out [OutputStructureFormat]</li> <li>By running the above command, we figure out the NUMLOCI, and NUMINDS (number of individuals) parameters for structure and create the "mainparams" file from a skeletal file: <ul><li> sed "s/XXNUMLOCIXX/$NUMLOCI/;s/XXNUMINDSXX/$NUMINDS/" skeletal_mainparams > [OutputStructureParams]</li> </li></ul> </ul> <br /> </li> <li><b>Structure:</b> Run STRUCTURE. <ul> <li>structure -i [OutputStructureFormat] -m [OutputStructureParams] -e extraparams -o [StructureOutput] -K [MaxPopulation] </ul> <br /> </li> </ul>
http://www.opmw.org/export/resource/WorkflowTemplate/STRUCTURED_ASSOCIATION_TEST http://www.w3.org/ns/prov#wasAttributedTo "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/STRUCTURED_ASSOCIATION_TEST http://www.w3.org/ns/prov#hadPrimarySource "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/genomics/ontology/genomics/Structured_Association_Test.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/STRUCTURED_ASSOCIATION_TEST http://www.opmw.org/ontology/hasNativeSystemTemplate "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/genomics/ontology/genomics/Structured_Association_Test.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/PLOTCORRELATIONSCORE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/PLOTCORRELATIONSCORE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/ns/prov#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/PLOTCORRELATIONSCORE http://www.w3.org/2000/01/rdf-schema#label PlotCorrelationScore
http://www.opmw.org/export/resource/WorkflowTemplate/PLOTCORRELATIONSCORE http://www.opmw.org/ontology/hasTemplateDiagram "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/TextAnalytics/ontology/TextAnalytics/PlotCorrelationScore.owl.png"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/PLOTCORRELATIONSCORE http://www.opmw.org/ontology/createdInWorkflowSystem "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/PLOTCORRELATIONSCORE http://purl.org/dc/elements/1.1/rights "http://creativecommons.org/licenses/by-sa/3.0/"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/PLOTCORRELATIONSCORE http://www.opmw.org/ontology/versionNumber "2"^^<http://www.w3.org/2001/XMLSchema#int>
http://www.opmw.org/export/resource/WorkflowTemplate/PLOTCORRELATIONSCORE http://purl.org/dc/terms/contributor http://www.opmw.org/export/resource/Agent/DANIEL
http://www.opmw.org/export/resource/WorkflowTemplate/PLOTCORRELATIONSCORE http://www.opmw.org/ontology/hasDocumentation
http://www.opmw.org/export/resource/WorkflowTemplate/PLOTCORRELATIONSCORE http://www.w3.org/ns/prov#wasAttributedTo "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/PLOTCORRELATIONSCORE http://www.w3.org/ns/prov#hadPrimarySource "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/TextAnalytics/ontology/TextAnalytics/PlotCorrelationScore.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/PLOTCORRELATIONSCORE http://www.opmw.org/ontology/hasNativeSystemTemplate "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/TextAnalytics/ontology/TextAnalytics/PlotCorrelationScore.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/SAMPLETHENMODEL http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/SAMPLETHENMODEL http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/ns/prov#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/SAMPLETHENMODEL http://www.w3.org/2000/01/rdf-schema#label SampleThenModel
http://www.opmw.org/export/resource/WorkflowTemplate/SAMPLETHENMODEL http://www.opmw.org/ontology/hasTemplateDiagram "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/DMDomain/ontology/DMDomain/SampleThenModel.owl.png"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/SAMPLETHENMODEL http://www.opmw.org/ontology/createdInWorkflowSystem "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/SAMPLETHENMODEL http://purl.org/dc/elements/1.1/rights "http://creativecommons.org/licenses/by-sa/3.0/"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/SAMPLETHENMODEL http://www.opmw.org/ontology/versionNumber "2"^^<http://www.w3.org/2001/XMLSchema#int>
http://www.opmw.org/export/resource/WorkflowTemplate/SAMPLETHENMODEL http://purl.org/dc/terms/contributor http://www.opmw.org/export/resource/Agent/DANIEL
http://www.opmw.org/export/resource/WorkflowTemplate/SAMPLETHENMODEL http://www.opmw.org/ontology/hasDocumentation Please see the documentation at <a href="http://seagull.isi.edu/wiki/wings/Weka_Data_Mining_Domain">http://seagull.isi.edu/wiki/wings/Weka_Data_Mining_Domain</a><br><br>
http://www.opmw.org/export/resource/WorkflowTemplate/SAMPLETHENMODEL http://www.w3.org/ns/prov#wasAttributedTo "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/SAMPLETHENMODEL http://www.w3.org/ns/prov#hadPrimarySource "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/DMDomain/ontology/DMDomain/SampleThenModel.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/SAMPLETHENMODEL http://www.opmw.org/ontology/hasNativeSystemTemplate "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/DMDomain/ontology/DMDomain/SampleThenModel.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELSAMPLEDDATAANDCLASSIFY http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/MODELSAMPLEDDATAANDCLASSIFY http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/ns/prov#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/MODELSAMPLEDDATAANDCLASSIFY http://www.w3.org/2000/01/rdf-schema#label ModelSampledDataAndClassify
http://www.opmw.org/export/resource/WorkflowTemplate/MODELSAMPLEDDATAANDCLASSIFY http://www.opmw.org/ontology/hasTemplateDiagram "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/DMDomain/ontology/DMDomain/ModelSampledDataAndClassify.owl.png"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELSAMPLEDDATAANDCLASSIFY http://www.opmw.org/ontology/createdInWorkflowSystem "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELSAMPLEDDATAANDCLASSIFY http://purl.org/dc/elements/1.1/rights "http://creativecommons.org/licenses/by-sa/3.0/"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELSAMPLEDDATAANDCLASSIFY http://www.opmw.org/ontology/versionNumber "2"^^<http://www.w3.org/2001/XMLSchema#int>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELSAMPLEDDATAANDCLASSIFY http://purl.org/dc/terms/contributor http://www.opmw.org/export/resource/Agent/DANIEL
http://www.opmw.org/export/resource/WorkflowTemplate/MODELSAMPLEDDATAANDCLASSIFY http://www.opmw.org/ontology/hasDocumentation Please see the documentation at <a href="http://seagull.isi.edu/wiki/wings/Weka_Data_Mining_Domain">http://seagull.isi.edu/wiki/wings/Weka_Data_Mining_Domain</a><br><br>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELSAMPLEDDATAANDCLASSIFY http://www.w3.org/ns/prov#wasAttributedTo "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELSAMPLEDDATAANDCLASSIFY http://www.w3.org/ns/prov#hadPrimarySource "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/DMDomain/ontology/DMDomain/ModelSampledDataAndClassify.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELSAMPLEDDATAANDCLASSIFY http://www.opmw.org/ontology/hasNativeSystemTemplate "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/DMDomain/ontology/DMDomain/ModelSampledDataAndClassify.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELER http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/MODELER http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.w3.org/ns/prov#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/MODELER http://www.w3.org/2000/01/rdf-schema#label Modeler
http://www.opmw.org/export/resource/WorkflowTemplate/MODELER http://www.opmw.org/ontology/hasTemplateDiagram "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/DMDomain/ontology/DMDomain/Modeler.owl.png"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELER http://www.opmw.org/ontology/hasTemplateDiagram "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/1/DMDomain/ontology/DMDomain/Modeler.owl.png"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELER http://www.opmw.org/ontology/createdInWorkflowSystem "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELER http://purl.org/dc/elements/1.1/rights "http://creativecommons.org/licenses/by-sa/3.0/"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELER http://www.opmw.org/ontology/versionNumber "2"^^<http://www.w3.org/2001/XMLSchema#int>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELER http://purl.org/dc/terms/contributor http://www.opmw.org/export/resource/Agent/FRITZ
http://www.opmw.org/export/resource/WorkflowTemplate/MODELER http://purl.org/dc/terms/contributor http://www.opmw.org/export/resource/Agent/DANIEL
http://www.opmw.org/export/resource/WorkflowTemplate/MODELER http://www.opmw.org/ontology/hasDocumentation Please see the documentation at <a href="http://seagull.isi.edu/wiki/wings/Weka_Data_Mining_Domain">http://seagull.isi.edu/wiki/wings/Weka_Data_Mining_Domain</a><br><br>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELER http://www.w3.org/ns/prov#wasAttributedTo "http://wings.isi.edu"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELER http://www.w3.org/ns/prov#hadPrimarySource "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/DMDomain/ontology/DMDomain/Modeler.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELER http://www.w3.org/ns/prov#hadPrimarySource "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/1/DMDomain/ontology/DMDomain/Modeler.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELER http://www.opmw.org/ontology/hasNativeSystemTemplate "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/2/DMDomain/ontology/DMDomain/Modeler.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/MODELER http://www.opmw.org/ontology/hasNativeSystemTemplate "http://wind.isi.edu/marbles/assets/components/workflow_portal/users/1/DMDomain/ontology/DMDomain/Modeler.owl"^^<http://www.w3.org/2001/XMLSchema#anyURI>
http://www.opmw.org/export/resource/WorkflowTemplate/ATLASBASEDROIANALYSISFORDTIDATA http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/ATLASBASEDROIANALYSISFORDTIDATA http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/ATLASBASEDROIANALYSISFORDTIDATA http://purl.org/dc/terms/modified Tue Jun 15 10:44:05 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/ATLASBASEDROIANALYSISFORDTIDATA http://www.w3.org/2000/01/rdf-schema#label Atlas based ROI analysis for dti data
http://www.opmw.org/export/resource/WorkflowTemplate/ATLASBASEDROIANALYSISFORDTIDATA http://www.w3.org/2000/01/rdf-schema#comment Use an atlas ROI approach to compute mean DTI-derived metric, e.g. FA.
http://www.opmw.org/export/resource/WorkflowTemplate/ATLASBASEDROIANALYSISFORDTIDATA http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/ATLASBASEDROIANALYSISFORDTIDATA http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/ATLASBASEDROIANALYSISFORDTIDATA http://www.opmw.org/ontology/hasDocumentation Use an atlas ROI approach to compute mean DTI-derived metric, e.g. FA.
http://www.opmw.org/export/resource/WorkflowTemplate/ATLASBASEDROIANALYSISFORDTIDATA http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/Main/KristiClark
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV3 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV3 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV3 http://purl.org/dc/terms/modified Mon Nov 16 13:21:56 PST 2009
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV3 http://www.w3.org/2000/01/rdf-schema#label Automatic Tissue Classification v3
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV3 http://www.w3.org/2000/01/rdf-schema#comment This workflow takes raw un-skull-stripped volumes and generates tables of the total, GM, WM and CSF volumes.
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV3 http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV3 http://www.opmw.org/ontology/versionNumber Structural Analysis
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV3 http://www.opmw.org/ontology/hasDocumentation This workflow takes raw un-skull-stripped volumes and generates tables of the total, GM, WM and CSF volumes.
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV3 http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_TissueVolumes
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSISWITHSTUDYMODULE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSISWITHSTUDYMODULE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSISWITHSTUDYMODULE http://purl.org/dc/terms/modified Thu May 12 13:01:50 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSISWITHSTUDYMODULE http://www.w3.org/2000/01/rdf-schema#label Local Shape Analysis With Study Module
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSISWITHSTUDYMODULE http://www.w3.org/2000/01/rdf-schema#comment Compares per-vertex attributes of two groups. The attributes are radial distance and displacement feature.
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSISWITHSTUDYMODULE http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSISWITHSTUDYMODULE http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSISWITHSTUDYMODULE http://www.opmw.org/ontology/hasDocumentation Compares per-vertex attributes of two groups. The attributes are radial distance and displacement feature.
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSISWITHSTUDYMODULE http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_LSA
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(56STRUCTURES) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(56STRUCTURES) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(56STRUCTURES) http://purl.org/dc/terms/modified Thu Jun 17 10:50:19 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(56STRUCTURES) http://www.w3.org/2000/01/rdf-schema#label BrainParser (56 Structures)
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(56STRUCTURES) http://www.w3.org/2000/01/rdf-schema#comment Detects 56 neuroanatomical structures
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(56STRUCTURES) http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(56STRUCTURES) http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(56STRUCTURES) http://www.opmw.org/ontology/hasDocumentation Detects 56 neuroanatomical structures
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(56STRUCTURES) http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/CCBPrincipalsMeetings_IndividResearcherProj_ZhuowenTu
http://www.opmw.org/export/resource/WorkflowTemplate/MODALSCALE_V16_DAT2 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/MODALSCALE_V16_DAT2 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/MODALSCALE_V16_DAT2 http://www.w3.org/2000/01/rdf-schema#label ModalScale_V16_DAT2
http://www.opmw.org/export/resource/WorkflowTemplate/MODALSCALE_V16_DAT2 http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/UNTITLED http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/UNTITLED http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/UNTITLED http://www.w3.org/2000/01/rdf-schema#label Untitled
http://www.opmw.org/export/resource/WorkflowTemplate/UNTITLED http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPTWO) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPTWO) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPTWO) http://purl.org/dc/terms/modified Tue May 03 12:18:58 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPTWO) http://www.w3.org/2000/01/rdf-schema#label Global Shape Analysis - Two Groups (Step Two)
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPTWO) http://www.w3.org/2000/01/rdf-schema#comment This workflow runs after the full GSA workflow has completed. It allows the user to reslice the subjects into new cohorts before running the statistical comparisons.
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPTWO) http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPTWO) http://purl.org/dc/elements/1.1/creator Ivo Dinov
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPTWO) http://purl.org/dc/elements/1.1/creator Alex Genco
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPTWO) http://purl.org/dc/elements/1.1/creator Alen Zamanyan
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPTWO) http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPTWO) http://www.opmw.org/ontology/hasDocumentation This workflow runs after the full GSA workflow has completed. It allows the user to reslice the subjects into new cohorts before running the statistical comparisons.
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPTWO) http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_GSA
http://www.opmw.org/export/resource/WorkflowTemplate/WAVELETANALYSISOFIMAGEREGISTRATION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/WAVELETANALYSISOFIMAGEREGISTRATION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/WAVELETANALYSISOFIMAGEREGISTRATION http://purl.org/dc/terms/modified Thu Jun 03 15:44:51 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/WAVELETANALYSISOFIMAGEREGISTRATION http://www.w3.org/2000/01/rdf-schema#label Wavelet Analysis of Image Registration
http://www.opmw.org/export/resource/WorkflowTemplate/WAVELETANALYSISOFIMAGEREGISTRATION http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/WAVELETANALYSISOFIMAGEREGISTRATION http://www.opmw.org/ontology/versionNumber 2.0
http://www.opmw.org/export/resource/WorkflowTemplate/BASICFMRIPREPROCESSING http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/BASICFMRIPREPROCESSING http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/BASICFMRIPREPROCESSING http://purl.org/dc/terms/modified Thu Apr 21 13:07:38 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/BASICFMRIPREPROCESSING http://www.w3.org/2000/01/rdf-schema#label Basic fMRI PreProcessing
http://www.opmw.org/export/resource/WorkflowTemplate/BASICFMRIPREPROCESSING http://www.w3.org/2000/01/rdf-schema#comment This is a basic fMRI data preprocessing workflow. The output of this workflow can be entered into one's statistical engine of choice.
http://www.opmw.org/export/resource/WorkflowTemplate/BASICFMRIPREPROCESSING http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/BASICFMRIPREPROCESSING http://purl.org/dc/elements/1.1/creator Jack Van Horn
http://www.opmw.org/export/resource/WorkflowTemplate/BASICFMRIPREPROCESSING http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/BASICFMRIPREPROCESSING http://www.opmw.org/ontology/hasDocumentation This is a basic fMRI data preprocessing workflow. The output of this workflow can be entered into one's statistical engine of choice.
http://www.opmw.org/export/resource/WorkflowTemplate/BASICFMRIPREPROCESSING http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/BasicfMRIPreprocessing
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMARSIWORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMARSIWORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMARSIWORKFLOW http://purl.org/dc/terms/modified Thu Jun 02 15:59:15 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMARSIWORKFLOW http://www.w3.org/2000/01/rdf-schema#label GAMMA RSI Workflow
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMARSIWORKFLOW http://www.w3.org/2000/01/rdf-schema#comment The Graphical-Model-based Multivariate Analysis (GAMMA) workflow enables Bayesian data-mining and analysis of high-dimensional data. Specific applications include neuroimaging data analysis, primarily lesion-based studies, functional MR-based studies, and morphometric studies.
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMARSIWORKFLOW http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMARSIWORKFLOW http://purl.org/dc/elements/1.1/creator Sam Hobel
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMARSIWORKFLOW http://www.opmw.org/ontology/versionNumber 1.1
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMARSIWORKFLOW http://www.opmw.org/ontology/hasDocumentation The Graphical-Model-based Multivariate Analysis (GAMMA) workflow enables Bayesian data-mining and analysis of high-dimensional data. Specific applications include neuroimaging data analysis, primarily lesion-based studies, functional MR-based studies, and morphometric studies.
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMARSIWORKFLOW http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_GAMMA
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(COMPLETE) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(COMPLETE) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(COMPLETE) http://purl.org/dc/terms/modified Tue May 03 12:18:58 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(COMPLETE) http://www.w3.org/2000/01/rdf-schema#label Global Shape Analysis - Two Groups (Complete)
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(COMPLETE) http://www.w3.org/2000/01/rdf-schema#comment Compute global shape measures in a set of 56 ROIs. Compare these measurements across three groups.
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(COMPLETE) http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(COMPLETE) http://purl.org/dc/elements/1.1/creator Ivo Dinov
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(COMPLETE) http://purl.org/dc/elements/1.1/creator Alex Genco
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(COMPLETE) http://purl.org/dc/elements/1.1/creator Alen Zamanyan
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(COMPLETE) http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(COMPLETE) http://www.opmw.org/ontology/hasDocumentation Compute global shape measures in a set of 56 ROIs. Compare these measurements across three groups.
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(COMPLETE) http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_GSA
http://www.opmw.org/export/resource/WorkflowTemplate/SECONDLEVELFEAT http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/SECONDLEVELFEAT http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/SECONDLEVELFEAT http://purl.org/dc/terms/modified Wed Jul 28 09:19:42 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/SECONDLEVELFEAT http://www.w3.org/2000/01/rdf-schema#label Second Level FEAT
http://www.opmw.org/export/resource/WorkflowTemplate/SECONDLEVELFEAT http://www.w3.org/2000/01/rdf-schema#comment This workflow performs second level 2 group comparisons.
http://www.opmw.org/export/resource/WorkflowTemplate/SECONDLEVELFEAT http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/SECONDLEVELFEAT http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/SECONDLEVELFEAT http://www.opmw.org/ontology/hasDocumentation This workflow performs second level 2 group comparisons.
http://www.opmw.org/export/resource/WorkflowTemplate/SECONDLEVELFEAT http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_fMRIFEAT
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSIS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSIS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSIS http://purl.org/dc/terms/modified Mon Aug 23 11:47:37 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSIS http://www.w3.org/2000/01/rdf-schema#label Local Shape Analysis
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSIS http://www.w3.org/2000/01/rdf-schema#comment Compares per-vertex attributes of two groups. The attributes are radial distance and displacement feature.
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSIS http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSIS http://purl.org/dc/elements/1.1/creator Boris Gutman
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSIS http://www.opmw.org/ontology/versionNumber v1
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSIS http://www.opmw.org/ontology/hasDocumentation Compares per-vertex attributes of two groups. The attributes are radial distance and displacement feature.
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSIS http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_LSA
http://www.opmw.org/export/resource/WorkflowTemplate/LOCALSHAPEANALYSIS http://www.opmw.org/ontology/hasNativeSystemTemplate http://wiki.loni.usc.edu/twiki/bin/view/CCB/PipelineWorkflows_LSA
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(SUBCORTICAL) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(SUBCORTICAL) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(SUBCORTICAL) http://purl.org/dc/terms/modified Thu Jun 17 10:51:31 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(SUBCORTICAL) http://www.w3.org/2000/01/rdf-schema#label BrainParser (Subcortical)
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(SUBCORTICAL) http://www.w3.org/2000/01/rdf-schema#comment Automatically detects eight subcortical structures
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(SUBCORTICAL) http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(SUBCORTICAL) http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(SUBCORTICAL) http://www.opmw.org/ontology/hasDocumentation Automatically detects eight subcortical structures
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(SUBCORTICAL) http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/CCBPrincipalsMeetings_IndividResearcherProj_ZhuowenTu
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(TOPOLOGICALLYCORRECTED) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(TOPOLOGICALLYCORRECTED) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(TOPOLOGICALLYCORRECTED) http://purl.org/dc/terms/modified Tue May 03 12:18:58 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(TOPOLOGICALLYCORRECTED) http://www.w3.org/2000/01/rdf-schema#label Global Shape Analysis - Three Groups (Topologically Corrected)
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(TOPOLOGICALLYCORRECTED) http://www.w3.org/2000/01/rdf-schema#comment Compute global shape measures in a set of 56 ROIs. Compare these measurements across three groups.
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(TOPOLOGICALLYCORRECTED) http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(TOPOLOGICALLYCORRECTED) http://purl.org/dc/elements/1.1/creator Ivo Dinov
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(TOPOLOGICALLYCORRECTED) http://purl.org/dc/elements/1.1/creator Alex Genco
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(TOPOLOGICALLYCORRECTED) http://purl.org/dc/elements/1.1/creator Alen Zamanyan
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(TOPOLOGICALLYCORRECTED) http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(TOPOLOGICALLYCORRECTED) http://www.opmw.org/ontology/hasDocumentation Compute global shape measures in a set of 56 ROIs. Compare these measurements across three groups.
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(TOPOLOGICALLYCORRECTED) http://www.opmw.org/ontology/hasNativeSystemTemplate http://wiki.loni.usc.edu/twiki/bin/view/CCB/PipelineWorkflows_GSA
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(COMPLETE) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(COMPLETE) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(COMPLETE) http://purl.org/dc/terms/modified Tue May 03 12:18:58 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(COMPLETE) http://www.w3.org/2000/01/rdf-schema#label Global Shape Analysis - Three Groups (Complete)
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(COMPLETE) http://www.w3.org/2000/01/rdf-schema#comment Compute global shape measures in a set of 56 ROIs. Compare these measurements across three groups.
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(COMPLETE) http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(COMPLETE) http://purl.org/dc/elements/1.1/creator Ivo Dinov
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(COMPLETE) http://purl.org/dc/elements/1.1/creator Alex Genco
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(COMPLETE) http://purl.org/dc/elements/1.1/creator Alen Zamanyan
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(COMPLETE) http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(COMPLETE) http://www.opmw.org/ontology/hasDocumentation Compute global shape measures in a set of 56 ROIs. Compare these measurements across three groups.
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-THREEGROUPS(COMPLETE) http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_GSA
http://www.opmw.org/export/resource/WorkflowTemplate/MAQ_SAMTOOLS_BOWTIE_INTEGRATED_012211_FGENE1 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/MAQ_SAMTOOLS_BOWTIE_INTEGRATED_012211_FGENE1 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/MAQ_SAMTOOLS_BOWTIE_INTEGRATED_012211_FGENE1 http://purl.org/dc/terms/modified
http://www.opmw.org/export/resource/WorkflowTemplate/MAQ_SAMTOOLS_BOWTIE_INTEGRATED_012211_FGENE1 http://www.w3.org/2000/01/rdf-schema#label MAQ_SAMtools_Bowtie_Integrated_012211_fgene1
http://www.opmw.org/export/resource/WorkflowTemplate/MAQ_SAMTOOLS_BOWTIE_INTEGRATED_012211_FGENE1 http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS http://purl.org/dc/terms/modified Thu Dec 23 12:25:17 PST 2010
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS http://www.w3.org/2000/01/rdf-schema#label Global Shape Analysis
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS http://www.w3.org/2000/01/rdf-schema#comment Compute global shape measures in a set of 56 ROIs. Compare these measurements across three groups.
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS http://www.opmw.org/ontology/hasDocumentation Compute global shape measures in a set of 56 ROIs. Compare these measurements across three groups.
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS http://www.opmw.org/ontology/hasNativeSystemTemplate http://wiki.loni.usc.edu/twiki/bin/view/CCB/PipelineWorkflows_GSA
http://www.opmw.org/export/resource/WorkflowTemplate/NRCAM_BETWEENCOHORTB http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/NRCAM_BETWEENCOHORTB http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/NRCAM_BETWEENCOHORTB http://www.w3.org/2000/01/rdf-schema#label NrCAM_BetweenCohortB
http://www.opmw.org/export/resource/WorkflowTemplate/NRCAM_BETWEENCOHORTB http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITEPROCESSING http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITEPROCESSING http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITEPROCESSING http://purl.org/dc/terms/modified Thu Jun 11 13:29:45 PDT 2009
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITEPROCESSING http://www.w3.org/2000/01/rdf-schema#label BrainSuite Processing
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITEPROCESSING http://www.w3.org/2000/01/rdf-schema#comment This example utilizes three tools from the BrainSuite package. Given a raw brain image in Analyze format, the objective of the workflow is to generate a file containing labels for each of the three tissue types, namely gray matter, white matter, and cerebrospinal fluid. The initial steps skullstrip the brain volume and perform inhomogeneity correction, prepping the image for the tissue classifier.
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITEPROCESSING http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITEPROCESSING http://purl.org/dc/elements/1.1/creator Alen Zamanyan
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITEPROCESSING http://purl.org/dc/elements/1.1/creator Shruthi Chakrapani
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITEPROCESSING http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITEPROCESSING http://www.opmw.org/ontology/hasDocumentation This example utilizes three tools from the BrainSuite package. Given a raw brain image in Analyze format, the objective of the workflow is to generate a file containing labels for each of the three tissue types, namely gray matter, white matter, and cerebrospinal fluid. The initial steps skullstrip the brain volume and perform inhomogeneity correction, prepping the image for the tissue classifier.
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITEPROCESSING http://www.opmw.org/ontology/hasNativeSystemTemplate http://pipeline.loni.ucla.edu/
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGORITHMWORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGORITHMWORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGORITHMWORKFLOW http://purl.org/dc/terms/modified Thu Jun 02 15:10:26 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGORITHMWORKFLOW http://www.w3.org/2000/01/rdf-schema#label GAMMA Algorithm Workflow
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGORITHMWORKFLOW http://www.w3.org/2000/01/rdf-schema#comment The Graphical-Model-based Multivariate Analysis (GAMMA) workflow enables Bayesian data-mining and analysis of high-dimensional data. Specific applications include neuroimaging data analysis, primarily lesion-based studies, functional MR-based studies, and morphometric studies.
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGORITHMWORKFLOW http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGORITHMWORKFLOW http://purl.org/dc/elements/1.1/creator Sam Hobel
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGORITHMWORKFLOW http://www.opmw.org/ontology/versionNumber 1.1
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGORITHMWORKFLOW http://www.opmw.org/ontology/hasDocumentation The Graphical-Model-based Multivariate Analysis (GAMMA) workflow enables Bayesian data-mining and analysis of high-dimensional data. Specific applications include neuroimaging data analysis, primarily lesion-based studies, functional MR-based studies, and morphometric studies.
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGORITHMWORKFLOW http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_GAMMA
http://www.opmw.org/export/resource/WorkflowTemplate/DSI_WORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/DSI_WORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/DSI_WORKFLOW http://purl.org/dc/terms/modified Mon Oct 19 11:53:30 PDT 2009
http://www.opmw.org/export/resource/WorkflowTemplate/DSI_WORKFLOW http://www.w3.org/2000/01/rdf-schema#label DSI_workflow
http://www.opmw.org/export/resource/WorkflowTemplate/DSI_WORKFLOW http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/DSI_WORKFLOW http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.trackvis.org/dtk/
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-DESIGNMATRIXOUTPUT http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-DESIGNMATRIXOUTPUT http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-DESIGNMATRIXOUTPUT http://purl.org/dc/terms/modified Tue May 03 12:30:08 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-DESIGNMATRIXOUTPUT http://www.w3.org/2000/01/rdf-schema#label Global Shape Analysis - Design Matrix Output
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-DESIGNMATRIXOUTPUT http://www.w3.org/2000/01/rdf-schema#comment Compute global shape measures in a set of 56 ROIs. Compare these measurements across three groups.
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-DESIGNMATRIXOUTPUT http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-DESIGNMATRIXOUTPUT http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-DESIGNMATRIXOUTPUT http://www.opmw.org/ontology/hasDocumentation Compute global shape measures in a set of 56 ROIs. Compare these measurements across three groups.
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-DESIGNMATRIXOUTPUT http://www.opmw.org/ontology/hasNativeSystemTemplate http://wiki.loni.usc.edu/twiki/bin/view/CCB/PipelineWorkflows_GSA
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(EXISTINGATLAS) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(EXISTINGATLAS) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(EXISTINGATLAS) http://purl.org/dc/terms/modified Wed Feb 03 09:33:56 PST 2010
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(EXISTINGATLAS) http://www.w3.org/2000/01/rdf-schema#label MDT with KLMI (Existing Atlas)
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(EXISTINGATLAS) http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(EXISTINGATLAS) http://purl.org/dc/elements/1.1/creator Claus Svarer
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(EXISTINGATLAS) http://purl.org/dc/elements/1.1/creator Boris Gutman
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(EXISTINGATLAS) http://www.opmw.org/ontology/hasNativeSystemTemplate http://wiki.loni.usc.edu/twiki/bin/view/CCB/SIGPNS_Summer2009_BG_CS_2
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV2 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV2 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV2 http://purl.org/dc/terms/modified Mon Nov 16 13:20:43 PST 2009
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV2 http://www.w3.org/2000/01/rdf-schema#label Automatic Tissue Classification v2
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV2 http://www.w3.org/2000/01/rdf-schema#comment This workflow takes raw un-skull-stripped volumes and generates tables of the total, GM, WM and CSF volumes.
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV2 http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV2 http://www.opmw.org/ontology/versionNumber Structural Analysis
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV2 http://www.opmw.org/ontology/hasDocumentation This workflow takes raw un-skull-stripped volumes and generates tables of the total, GM, WM and CSF volumes.
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV2 http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_TissueVolumes
http://www.opmw.org/export/resource/WorkflowTemplate/ASLPROCESS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/ASLPROCESS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/ASLPROCESS http://purl.org/dc/terms/modified Mon May 16 14:52:02 EDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/ASLPROCESS http://www.w3.org/2000/01/rdf-schema#label ASL Process
http://www.opmw.org/export/resource/WorkflowTemplate/ASLPROCESS http://www.w3.org/2000/01/rdf-schema#comment ASL_Process_Original: In this process, the input required are the Baseline CBF maps, Alpha_Measurement, the T1Estimate Directory that contains all the T1Estimate files, and T1W_3D. Process: A. The T1 Est files are concatenated in ConcatT1; Output – T1data.irc, T1data.nii, B. The Alpha value is obtained in Alpha; Output - Alpha.txt, Alpha_diff.nii C. Convert2nii converts the Baseline CBF file into NIFTI format;
http://www.opmw.org/export/resource/WorkflowTemplate/ASLPROCESS http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/ASLPROCESS http://purl.org/dc/elements/1.1/creator Nick Felicelli
http://www.opmw.org/export/resource/WorkflowTemplate/ASLPROCESS http://www.opmw.org/ontology/versionNumber 1.3
http://www.opmw.org/export/resource/WorkflowTemplate/ASLPROCESS http://www.opmw.org/ontology/hasDocumentation ASL_Process_Original: In this process, the input required are the Baseline CBF maps, Alpha_Measurement, the T1Estimate Directory that contains all the T1Estimate files, and T1W_3D. Process: A. The T1 Est files are concatenated in ConcatT1; Output – T1data.irc, T1data.nii, B. The Alpha value is obtained in Alpha; Output - Alpha.txt, Alpha_diff.nii C. Convert2nii converts the Baseline CBF file into NIFTI format;
http://www.opmw.org/export/resource/WorkflowTemplate/LSA_WITH_MLR_042911 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/LSA_WITH_MLR_042911 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/LSA_WITH_MLR_042911 http://www.w3.org/2000/01/rdf-schema#label LSA_with_MLR_042911
http://www.opmw.org/export/resource/WorkflowTemplate/LSA_WITH_MLR_042911 http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/TBM_STEP1B_022511 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/TBM_STEP1B_022511 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/TBM_STEP1B_022511 http://purl.org/dc/terms/modified
http://www.opmw.org/export/resource/WorkflowTemplate/TBM_STEP1B_022511 http://www.w3.org/2000/01/rdf-schema#label TBM_step1b_022511
http://www.opmw.org/export/resource/WorkflowTemplate/TBM_STEP1B_022511 http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/IRMA http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/IRMA http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/IRMA http://purl.org/dc/terms/modified Wed Jul 21 15:03:48 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/IRMA http://www.w3.org/2000/01/rdf-schema#label IRMA
http://www.opmw.org/export/resource/WorkflowTemplate/IRMA http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/IRMA http://purl.org/dc/elements/1.1/creator D. Stott Parker
http://www.opmw.org/export/resource/WorkflowTemplate/IRMA http://purl.org/dc/elements/1.1/creator Kelvin T. Leung
http://www.opmw.org/export/resource/WorkflowTemplate/IRMA http://www.opmw.org/ontology/versionNumber v1.0
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-SIMULATION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-SIMULATION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-SIMULATION http://purl.org/dc/terms/modified Thu May 19 16:02:15 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-SIMULATION http://www.w3.org/2000/01/rdf-schema#label dirac-workflow-simulation
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-SIMULATION http://www.w3.org/2000/01/rdf-schema#comment A basic workflow demonstrating the hierarchy of DIRAC modules and common processing tasks using a simulated data set.
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-SIMULATION http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-SIMULATION http://purl.org/dc/elements/1.1/creator Vishal Patel
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-SIMULATION http://www.opmw.org/ontology/versionNumber 2.2.0
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-SIMULATION http://www.opmw.org/ontology/hasDocumentation A basic workflow demonstrating the hierarchy of DIRAC modules and common processing tasks using a simulated data set.
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-SIMULATION http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/~vpatel
http://www.opmw.org/export/resource/WorkflowTemplate/SKULLSTRIPPING http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/SKULLSTRIPPING http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/SKULLSTRIPPING http://purl.org/dc/terms/modified Thu Jun 11 13:29:59 PDT 2009
http://www.opmw.org/export/resource/WorkflowTemplate/SKULLSTRIPPING http://www.w3.org/2000/01/rdf-schema#label Skullstripping
http://www.opmw.org/export/resource/WorkflowTemplate/SKULLSTRIPPING http://www.w3.org/2000/01/rdf-schema#comment This workflow combines components from the BrainSuite, FSL, and AIR packages. The aim of the process is to perform skullstripping along two distinct paths and to compare the results in order to determine the better of the two methods. As a first step, we run the raw brain volume through both Brain Surface Extractor and BET, which execute unique skullstripping algorithms. The process then splits into two independent segments. In one branch, the idea is to intersect the whole-brain masks generated by these tools in order to generate a tightly skullstripped result. In the other, we union the masks to achieve more tolerant skullstripping.
http://www.opmw.org/export/resource/WorkflowTemplate/SKULLSTRIPPING http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/SKULLSTRIPPING http://purl.org/dc/elements/1.1/creator Alen Zamanyan
http://www.opmw.org/export/resource/WorkflowTemplate/SKULLSTRIPPING http://purl.org/dc/elements/1.1/creator Shruthi Chakrapani
http://www.opmw.org/export/resource/WorkflowTemplate/SKULLSTRIPPING http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/SKULLSTRIPPING http://www.opmw.org/ontology/hasDocumentation This workflow combines components from the BrainSuite, FSL, and AIR packages. The aim of the process is to perform skullstripping along two distinct paths and to compare the results in order to determine the better of the two methods. As a first step, we run the raw brain volume through both Brain Surface Extractor and BET, which execute unique skullstripping algorithms. The process then splits into two independent segments. In one branch, the idea is to intersect the whole-brain masks generated by these tools in order to generate a tightly skullstripped result. In the other, we union the masks to achieve more tolerant skullstripping.
http://www.opmw.org/export/resource/WorkflowTemplate/SKULLSTRIPPING http://www.opmw.org/ontology/hasNativeSystemTemplate http://pipeline.loni.ucla.edu/
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSISWITHOUTFRACTALDIMENSION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSISWITHOUTFRACTALDIMENSION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSISWITHOUTFRACTALDIMENSION http://purl.org/dc/terms/modified Wed Jan 05 14:41:31 PST 2011
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSISWITHOUTFRACTALDIMENSION http://www.w3.org/2000/01/rdf-schema#label Global Shape Analysis Without Fractal Dimension
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSISWITHOUTFRACTALDIMENSION http://www.w3.org/2000/01/rdf-schema#comment Compute global shape measures in a set of 56 ROIs. Compare these measurements across three groups.
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSISWITHOUTFRACTALDIMENSION http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSISWITHOUTFRACTALDIMENSION http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSISWITHOUTFRACTALDIMENSION http://www.opmw.org/ontology/hasDocumentation Compute global shape measures in a set of 56 ROIs. Compare these measurements across three groups.
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSISWITHOUTFRACTALDIMENSION http://www.opmw.org/ontology/hasNativeSystemTemplate http://wiki.loni.usc.edu/twiki/bin/view/CCB/PipelineWorkflows_GSA
http://www.opmw.org/export/resource/WorkflowTemplate/RATBRAINFUNCTIONALANALYSIS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/RATBRAINFUNCTIONALANALYSIS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/RATBRAINFUNCTIONALANALYSIS http://purl.org/dc/terms/modified Wed Sep 01 12:02:32 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/RATBRAINFUNCTIONALANALYSIS http://www.w3.org/2000/01/rdf-schema#label Rat Brain Functional Analysis
http://www.opmw.org/export/resource/WorkflowTemplate/RATBRAINFUNCTIONALANALYSIS http://www.w3.org/2000/01/rdf-schema#comment Comparison of FDG data from two groups of rats
http://www.opmw.org/export/resource/WorkflowTemplate/RATBRAINFUNCTIONALANALYSIS http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/RATBRAINFUNCTIONALANALYSIS http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/RATBRAINFUNCTIONALANALYSIS http://www.opmw.org/ontology/hasDocumentation Comparison of FDG data from two groups of rats
http://www.opmw.org/export/resource/WorkflowTemplate/RATBRAINFUNCTIONALANALYSIS http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/RatBrainFunctionalAnalysis
http://www.opmw.org/export/resource/WorkflowTemplate/(GROUPED_FOLDED)INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/(GROUPED_FOLDED)INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/(GROUPED_FOLDED)INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://purl.org/dc/terms/modified Thu Mar 17 14:53:07 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/(GROUPED_FOLDED)INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://www.w3.org/2000/01/rdf-schema#label (Grouped/Folded) Integrated Bioinformatics (MAQ, SAMTools, Bowtie)
http://www.opmw.org/export/resource/WorkflowTemplate/(GROUPED_FOLDED)INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://www.w3.org/2000/01/rdf-schema#comment This workflow contains the first step of a genomics data analysis protocol designed and implemented by Federica Torri, Fabio Macciardi and IvoDinov to process large number of sequence data outputted by the Illumina sequencing pipeline. See Step II analysis (GATK/QC/Cleaning) here. This protocol is implemented using the LONI Pipeline environment and includes the following types of computational resources: * Mapping and Assembly with Qualities (MAQ) * Sequence Alignment and Mapping tools (SAMtools) * Bowtie * etc.
http://www.opmw.org/export/resource/WorkflowTemplate/(GROUPED_FOLDED)INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/(GROUPED_FOLDED)INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://purl.org/dc/elements/1.1/creator Federica Torri
http://www.opmw.org/export/resource/WorkflowTemplate/(GROUPED_FOLDED)INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://purl.org/dc/elements/1.1/creator Ivo Dinov
http://www.opmw.org/export/resource/WorkflowTemplate/(GROUPED_FOLDED)INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://purl.org/dc/elements/1.1/creator Fabio Macciardi
http://www.opmw.org/export/resource/WorkflowTemplate/(GROUPED_FOLDED)INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://www.opmw.org/ontology/versionNumber MAQ, SAMtools, Bowtie
http://www.opmw.org/export/resource/WorkflowTemplate/(GROUPED_FOLDED)INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://www.opmw.org/ontology/hasDocumentation This workflow contains the first step of a genomics data analysis protocol designed and implemented by Federica Torri, Fabio Macciardi and IvoDinov to process large number of sequence data outputted by the Illumina sequencing pipeline. See Step II analysis (GATK/QC/Cleaning) here. This protocol is implemented using the LONI Pipeline environment and includes the following types of computational resources: * Mapping and Assembly with Qualities (MAQ) * Sequence Alignment and Mapping tools (SAMtools) * Bowtie * etc.
http://www.opmw.org/export/resource/WorkflowTemplate/(GROUPED_FOLDED)INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://www.opmw.org/ontology/hasNativeSystemTemplate http://wiki.loni.usc.edu/twiki/bin/view/CCB/PipelineWorkflows_BioinfoMAQ
http://www.opmw.org/export/resource/WorkflowTemplate/GLM http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/GLM http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/GLM http://purl.org/dc/terms/modified Fri Sep 17 17:34:33 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/GLM http://www.w3.org/2000/01/rdf-schema#label GLM
http://www.opmw.org/export/resource/WorkflowTemplate/GLM http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(PEDIATRICATLAS) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(PEDIATRICATLAS) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(PEDIATRICATLAS) http://purl.org/dc/terms/modified Wed Dec 08 09:26:07 PST 2010
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(PEDIATRICATLAS) http://www.w3.org/2000/01/rdf-schema#label BrainParser (Pediatric Atlas)
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(PEDIATRICATLAS) http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSER(PEDIATRICATLAS) http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(POSTSHAPEREPORTER) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(POSTSHAPEREPORTER) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(POSTSHAPEREPORTER) http://purl.org/dc/terms/modified Tue May 03 12:18:58 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(POSTSHAPEREPORTER) http://www.w3.org/2000/01/rdf-schema#label Global Shape Analysis - Two Groups (Post Shape Reporter)
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(POSTSHAPEREPORTER) http://www.w3.org/2000/01/rdf-schema#comment This workflow runs after the full GSA workflow has completed. It allows the user to reslice the subjects into new cohorts before running the statistical comparisons.
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(POSTSHAPEREPORTER) http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(POSTSHAPEREPORTER) http://purl.org/dc/elements/1.1/creator Ivo Dinov
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(POSTSHAPEREPORTER) http://purl.org/dc/elements/1.1/creator Alex Genco
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(POSTSHAPEREPORTER) http://purl.org/dc/elements/1.1/creator Alen Zamanyan
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(POSTSHAPEREPORTER) http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(POSTSHAPEREPORTER) http://www.opmw.org/ontology/hasDocumentation This workflow runs after the full GSA workflow has completed. It allows the user to reslice the subjects into new cohorts before running the statistical comparisons.
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(POSTSHAPEREPORTER) http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_GSA
http://www.opmw.org/export/resource/WorkflowTemplate/INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://purl.org/dc/terms/modified Thu Mar 17 14:53:07 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://www.w3.org/2000/01/rdf-schema#label Integrated Bioinformatics (MAQ, SAMTools, Bowtie)
http://www.opmw.org/export/resource/WorkflowTemplate/INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://www.w3.org/2000/01/rdf-schema#comment This workflow contains the first step of a genomics data analysis protocol designed and implemented by Federica Torri, Fabio Macciardi and Ivo Dinov to process large number of sequence data outputted by the Illumina sequencing pipeline. See Step II analysis (GATK/QC/Cleaning) here. This protocol is implemented using the LONI Pipeline environment and includes the following types of computational resources: * Mapping and Assembly with Qualities (MAQ) * Sequence Alignment and Mapping tools (SAMtools) * Bowtie * etc.
http://www.opmw.org/export/resource/WorkflowTemplate/INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://purl.org/dc/elements/1.1/creator Federica Torri
http://www.opmw.org/export/resource/WorkflowTemplate/INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://purl.org/dc/elements/1.1/creator Ivo Dinov
http://www.opmw.org/export/resource/WorkflowTemplate/INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://purl.org/dc/elements/1.1/creator Fabio Macciardi
http://www.opmw.org/export/resource/WorkflowTemplate/INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://www.opmw.org/ontology/hasDocumentation This workflow contains the first step of a genomics data analysis protocol designed and implemented by Federica Torri, Fabio Macciardi and Ivo Dinov to process large number of sequence data outputted by the Illumina sequencing pipeline. See Step II analysis (GATK/QC/Cleaning) here. This protocol is implemented using the LONI Pipeline environment and includes the following types of computational resources: * Mapping and Assembly with Qualities (MAQ) * Sequence Alignment and Mapping tools (SAMtools) * Bowtie * etc.
http://www.opmw.org/export/resource/WorkflowTemplate/INTEGRATEDBIOINFORMATICS(MAQ,SAMTOOLS,BOWTIE) http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_BioinfoMAQ
http://www.opmw.org/export/resource/WorkflowTemplate/WORKFLOW2 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/WORKFLOW2 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/WORKFLOW2 http://www.w3.org/2000/01/rdf-schema#label workflow2
http://www.opmw.org/export/resource/WorkflowTemplate/WORKFLOW2 http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/CORTICALSURFACELABELING http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/CORTICALSURFACELABELING http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/CORTICALSURFACELABELING http://purl.org/dc/terms/modified Thu May 27 17:33:06 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/CORTICALSURFACELABELING http://www.w3.org/2000/01/rdf-schema#label Cortical Surface Labeling
http://www.opmw.org/export/resource/WorkflowTemplate/CORTICALSURFACELABELING http://www.w3.org/2000/01/rdf-schema#comment This workflow is designed to take a raw 3D volume - it will segment the brain into 56 ROIs, generate the cortical surfaces using two methods (namely BrainSuite09 and FreeSurfer), and will use the ShapeTools library (ImageToShapeAttribute), to project the labels onto the shape.
http://www.opmw.org/export/resource/WorkflowTemplate/CORTICALSURFACELABELING http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/CORTICALSURFACELABELING http://purl.org/dc/elements/1.1/creator Alen Zamanyan
http://www.opmw.org/export/resource/WorkflowTemplate/CORTICALSURFACELABELING http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/CORTICALSURFACELABELING http://www.opmw.org/ontology/hasDocumentation This workflow is designed to take a raw 3D volume - it will segment the brain into 56 ROIs, generate the cortical surfaces using two methods (namely BrainSuite09 and FreeSurfer), and will use the ShapeTools library (ImageToShapeAttribute), to project the labels onto the shape.
http://www.opmw.org/export/resource/WorkflowTemplate/CORTICALSURFACELABELING http://www.opmw.org/ontology/hasNativeSystemTemplate http://loni.ucla.edu
http://www.opmw.org/export/resource/WorkflowTemplate/FDIST2 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/FDIST2 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/FDIST2 http://www.w3.org/2000/01/rdf-schema#label fdist2
http://www.opmw.org/export/resource/WorkflowTemplate/FDIST2 http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/PLINKASSOCIATION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/PLINKASSOCIATION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/PLINKASSOCIATION http://purl.org/dc/terms/modified Tue Sep 24 14:12:12 PDT 2013
http://www.opmw.org/export/resource/WorkflowTemplate/PLINKASSOCIATION http://www.w3.org/2000/01/rdf-schema#label PLINK association
http://www.opmw.org/export/resource/WorkflowTemplate/PLINKASSOCIATION http://www.w3.org/2000/01/rdf-schema#comment PLINK is an open-source genome association analysis (GWAS) suite of tools providing a range of basic, large-scale computationally-efficient analyses. PLINK may be used for analysis of genotype/phenotype data, but requires some outside data-preprocessing (e.g., study design and planning, generating genotype or CNV calls from raw data). Support for visualization, annotation and storage of results is provided via gPLINK and Haploview. Problems addressed by the PLINK Association workflow Detailed Workflow Usage & Specifications The PLINK Association workflow provides testing for disease traits using comparing allele frequencies between cases and controls (asymptotic and empirical p-values are available). Specifically it provides the Cochran-Armitage trend test, Fisher's exact test, different genetic models (dominant, recessive and general), tests for stratified samples (e.g. Cochran-Mantel-Haenszel, Breslow-Day tests), a test for a quantitative trait; a test for differences in missing genotype rate between cases and controls; multilocus tests, using either Hotelling's T(2) statistic or a sum-statistic approach (evaluated by permutation) as well as haplotype tests. The basic tests can be performed with permutation, described in the following section to provide empirical p-values, and allow for different designs (e.g. by use of structured, within-cluster permutation)
http://www.opmw.org/export/resource/WorkflowTemplate/PLINKASSOCIATION http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/PLINKASSOCIATION http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/PLINKASSOCIATION http://www.opmw.org/ontology/hasDocumentation PLINK is an open-source genome association analysis (GWAS) suite of tools providing a range of basic, large-scale computationally-efficient analyses. PLINK may be used for analysis of genotype/phenotype data, but requires some outside data-preprocessing (e.g., study design and planning, generating genotype or CNV calls from raw data). Support for visualization, annotation and storage of results is provided via gPLINK and Haploview. Problems addressed by the PLINK Association workflow Detailed Workflow Usage & Specifications The PLINK Association workflow provides testing for disease traits using comparing allele frequencies between cases and controls (asymptotic and empirical p-values are available). Specifically it provides the Cochran-Armitage trend test, Fisher's exact test, different genetic models (dominant, recessive and general), tests for stratified samples (e.g. Cochran-Mantel-Haenszel, Breslow-Day tests), a test for a quantitative trait; a test for differences in missing genotype rate between cases and controls; multilocus tests, using either Hotelling's T(2) statistic or a sum-statistic approach (evaluated by permutation) as well as haplotype tests. The basic tests can be performed with permutation, described in the following section to provide empirical p-values, and allow for different designs (e.g. by use of structured, within-cluster permutation)
http://www.opmw.org/export/resource/WorkflowTemplate/PLINKASSOCIATION http://www.opmw.org/ontology/hasNativeSystemTemplate http://pngu.mgh.harvard.edu/~purcell/plink/
http://www.opmw.org/export/resource/WorkflowTemplate/ANTS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/ANTS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/ANTS http://purl.org/dc/terms/modified Sat Oct 29 14:03:33 AMST 2011
http://www.opmw.org/export/resource/WorkflowTemplate/ANTS http://www.w3.org/2000/01/rdf-schema#label ANTs
http://www.opmw.org/export/resource/WorkflowTemplate/ANTS http://www.w3.org/2000/01/rdf-schema#comment The purpose of this workflow is to take a label volume for an atlas (in this case the JHU 'Eve' atlas), and nonlinearly register it to two subjects using ANTs (Advanced Normalization Tools).
http://www.opmw.org/export/resource/WorkflowTemplate/ANTS http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/ANTS http://purl.org/dc/elements/1.1/creator Nic Novak
http://www.opmw.org/export/resource/WorkflowTemplate/ANTS http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/ANTS http://www.opmw.org/ontology/hasDocumentation The purpose of this workflow is to take a label volume for an atlas (in this case the JHU 'Eve' atlas), and nonlinearly register it to two subjects using ANTs (Advanced Normalization Tools).
http://www.opmw.org/export/resource/WorkflowTemplate/ANTS http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_ANTs
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITECORTICALSURFACEEXTRACTION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITECORTICALSURFACEEXTRACTION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITECORTICALSURFACEEXTRACTION http://purl.org/dc/terms/modified Thu Jan 21 09:00:59 PST 2010
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITECORTICALSURFACEEXTRACTION http://purl.org/dc/terms/modified Mon May 16 19:46:27 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITECORTICALSURFACEEXTRACTION http://www.w3.org/2000/01/rdf-schema#label BrainSuite Cortical Surface Extraction
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITECORTICALSURFACEEXTRACTION http://www.w3.org/2000/01/rdf-schema#comment Extracts the hemispheric surfaces of a skull-stripped brain volume
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITECORTICALSURFACEEXTRACTION http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITECORTICALSURFACEEXTRACTION http://purl.org/dc/elements/1.1/creator Alen Zamanyan
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITECORTICALSURFACEEXTRACTION http://www.opmw.org/ontology/versionNumber 11a
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITECORTICALSURFACEEXTRACTION http://www.opmw.org/ontology/versionNumber 09
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITECORTICALSURFACEEXTRACTION http://www.opmw.org/ontology/hasDocumentation Extracts the hemispheric surfaces of a skull-stripped brain volume
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITECORTICALSURFACEEXTRACTION http://www.opmw.org/ontology/hasNativeSystemTemplate http://loni.ucla.edu/Software/BrainSuite
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITECORTICALSURFACEEXTRACTION http://www.opmw.org/ontology/hasNativeSystemTemplate http://loni.usc.edu/Software/BrainSuite
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATEDROIEXTRACTION_VOLUMECALCULATION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATEDROIEXTRACTION_VOLUMECALCULATION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATEDROIEXTRACTION_VOLUMECALCULATION http://purl.org/dc/terms/modified Mon Jan 03 10:25:26 PST 2011
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATEDROIEXTRACTION_VOLUMECALCULATION http://purl.org/dc/terms/modified Thu May 09 13:45:09 PDT 2013
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATEDROIEXTRACTION_VOLUMECALCULATION http://www.w3.org/2000/01/rdf-schema#label Automated ROI Extraction/Volume Calculation
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATEDROIEXTRACTION_VOLUMECALCULATION http://www.w3.org/2000/01/rdf-schema#comment Automatically segments the brain into 56 ROIs and calculates the volume of each region
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATEDROIEXTRACTION_VOLUMECALCULATION http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATEDROIEXTRACTION_VOLUMECALCULATION http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATEDROIEXTRACTION_VOLUMECALCULATION http://www.opmw.org/ontology/versionNumber 1.1
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATEDROIEXTRACTION_VOLUMECALCULATION http://www.opmw.org/ontology/hasDocumentation Automatically segments the brain into 56 ROIs and calculates the volume of each region
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATEDROIEXTRACTION_VOLUMECALCULATION http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/CCBPrincipalsMeetings_IndividResearcherProj_ZhuowenTu
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATEDROIEXTRACTION_VOLUMECALCULATION http://www.opmw.org/ontology/hasNativeSystemTemplate http://wiki.loni.usc.edu/twiki/bin/view/CCB/CCBPrincipalsMeetings_IndividResearcherProj_ZhuowenTu
http://www.opmw.org/export/resource/WorkflowTemplate/FMR_USING_AIR http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/FMR_USING_AIR http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/FMR_USING_AIR http://purl.org/dc/terms/modified Thu Aug 28 13:59:51 PDT 2008
http://www.opmw.org/export/resource/WorkflowTemplate/FMR_USING_AIR http://www.w3.org/2000/01/rdf-schema#label fMR_using_AIR
http://www.opmw.org/export/resource/WorkflowTemplate/FMR_USING_AIR http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/COMPLETEPCAREGISTRATION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/COMPLETEPCAREGISTRATION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/COMPLETEPCAREGISTRATION http://purl.org/dc/terms/modified Tue Nov 02 17:35:05 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/COMPLETEPCAREGISTRATION http://www.w3.org/2000/01/rdf-schema#label Complete PCA Registration
http://www.opmw.org/export/resource/WorkflowTemplate/COMPLETEPCAREGISTRATION http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/COMPLETEPCAREGISTRATION http://purl.org/dc/elements/1.1/creator Sam Hobel
http://www.opmw.org/export/resource/WorkflowTemplate/COMPLETEPCAREGISTRATION http://purl.org/dc/elements/1.1/creator Alen Zamanyan
http://www.opmw.org/export/resource/WorkflowTemplate/COMPLETEPCAREGISTRATION http://purl.org/dc/elements/1.1/creator Gautam Prasad
http://www.opmw.org/export/resource/WorkflowTemplate/COMPLETEPCAREGISTRATION http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/SULCALGYRALSKELETON http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/SULCALGYRALSKELETON http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/SULCALGYRALSKELETON http://purl.org/dc/terms/modified Wed Aug 20 10:58:50 PDT 2008
http://www.opmw.org/export/resource/WorkflowTemplate/SULCALGYRALSKELETON http://www.w3.org/2000/01/rdf-schema#label Sulcal Gyral Skeleton
http://www.opmw.org/export/resource/WorkflowTemplate/SULCALGYRALSKELETON http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/SPM8WORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/SPM8WORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/SPM8WORKFLOW http://purl.org/dc/terms/modified Mon Apr 29 16:07:07 PDT 2013
http://www.opmw.org/export/resource/WorkflowTemplate/SPM8WORKFLOW http://www.w3.org/2000/01/rdf-schema#label SPM8 Workflow
http://www.opmw.org/export/resource/WorkflowTemplate/SPM8WORKFLOW http://www.w3.org/2000/01/rdf-schema#comment Sample SPM workflow
http://www.opmw.org/export/resource/WorkflowTemplate/SPM8WORKFLOW http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/SPM8WORKFLOW http://purl.org/dc/elements/1.1/creator Sam Hobel
http://www.opmw.org/export/resource/WorkflowTemplate/SPM8WORKFLOW http://www.opmw.org/ontology/hasDocumentation Sample SPM workflow
http://www.opmw.org/export/resource/WorkflowTemplate/SPM8WORKFLOW http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.fil.ion.ucl.ac.uk/spm/
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(1SUBJECTBIAS) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(1SUBJECTBIAS) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(1SUBJECTBIAS) http://purl.org/dc/terms/modified Wed Feb 03 09:34:14 PST 2010
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(1SUBJECTBIAS) http://www.w3.org/2000/01/rdf-schema#label MDT with KLMI (1 Subject Bias)
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(1SUBJECTBIAS) http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(1SUBJECTBIAS) http://purl.org/dc/elements/1.1/creator Claus Svarer
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(1SUBJECTBIAS) http://purl.org/dc/elements/1.1/creator Boris Gutman
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(1SUBJECTBIAS) http://www.opmw.org/ontology/hasNativeSystemTemplate http://wiki.loni.usc.edu/twiki/bin/view/CCB/SIGPNS_Summer2009_BG_CS_2
http://www.opmw.org/export/resource/WorkflowTemplate/ATLASBASEDTRACTOGRAPHY http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/ATLASBASEDTRACTOGRAPHY http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/ATLASBASEDTRACTOGRAPHY http://purl.org/dc/terms/modified Wed Jul 29 13:36:18 PDT 2009
http://www.opmw.org/export/resource/WorkflowTemplate/ATLASBASEDTRACTOGRAPHY http://www.w3.org/2000/01/rdf-schema#label Atlas based tractography
http://www.opmw.org/export/resource/WorkflowTemplate/ATLASBASEDTRACTOGRAPHY http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/ATLASBASEDTRACTOGRAPHY http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/ATLASBASEDTRACTOGRAPHY http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/Main/KristiClark
http://www.opmw.org/export/resource/WorkflowTemplate/AIRRECONCILE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/AIRRECONCILE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/AIRRECONCILE http://purl.org/dc/terms/modified Wed Feb 03 09:31:49 PST 2010
http://www.opmw.org/export/resource/WorkflowTemplate/AIRRECONCILE http://www.w3.org/2000/01/rdf-schema#label AIR Reconcile
http://www.opmw.org/export/resource/WorkflowTemplate/AIRRECONCILE http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/AIRRECONCILE http://purl.org/dc/elements/1.1/creator Claus Svarer
http://www.opmw.org/export/resource/WorkflowTemplate/AIRRECONCILE http://purl.org/dc/elements/1.1/creator Boris Gutman
http://www.opmw.org/export/resource/WorkflowTemplate/AIRRECONCILE http://www.opmw.org/ontology/hasNativeSystemTemplate http://wiki.loni.usc.edu/twiki/bin/view/CCB/SIGPNS_Summer2009_BG_CS_2
http://www.opmw.org/export/resource/WorkflowTemplate/4ALAN_RUSSJACOBS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/4ALAN_RUSSJACOBS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/4ALAN_RUSSJACOBS http://purl.org/dc/terms/modified
http://www.opmw.org/export/resource/WorkflowTemplate/4ALAN_RUSSJACOBS http://www.w3.org/2000/01/rdf-schema#label 4Alan_RussJacobs
http://www.opmw.org/export/resource/WorkflowTemplate/4ALAN_RUSSJACOBS http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV1 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV1 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV1 http://purl.org/dc/terms/modified Mon Nov 16 13:21:56 PST 2009
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV1 http://www.w3.org/2000/01/rdf-schema#label Automatic Tissue Classification v1
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV1 http://www.w3.org/2000/01/rdf-schema#comment This workflow takes raw un-skull-stripped volumes and generates tables of the total, GM, WM and CSF volumes.
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV1 http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV1 http://www.opmw.org/ontology/versionNumber Structural Analysis
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV1 http://www.opmw.org/ontology/hasDocumentation This workflow takes raw un-skull-stripped volumes and generates tables of the total, GM, WM and CSF volumes.
http://www.opmw.org/export/resource/WorkflowTemplate/AUTOMATICTISSUECLASSIFICATIONV1 http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_TissueVolumes
http://www.opmw.org/export/resource/WorkflowTemplate/DXTOSTL http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/DXTOSTL http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/DXTOSTL http://purl.org/dc/terms/modified Wed Jul 25 22:51:36 PDT 2012
http://www.opmw.org/export/resource/WorkflowTemplate/DXTOSTL http://www.w3.org/2000/01/rdf-schema#label DxToStl
http://www.opmw.org/export/resource/WorkflowTemplate/DXTOSTL http://www.w3.org/2000/01/rdf-schema#comment This workflow converts between different shape/mesh file formats and allows optional QEM shape simplification.
http://www.opmw.org/export/resource/WorkflowTemplate/DXTOSTL http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/DXTOSTL http://www.opmw.org/ontology/hasDocumentation This workflow converts between different shape/mesh file formats and allows optional QEM shape simplification.
http://www.opmw.org/export/resource/WorkflowTemplate/DXTOSTL http://www.opmw.org/ontology/hasNativeSystemTemplate http://wiki.loni.usc.edu/twiki/bin/view/CCB/PipelineWorkflows_ShapeTranslationSimplificationPipe
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(MULTISCALEITERATIVE) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(MULTISCALEITERATIVE) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(MULTISCALEITERATIVE) http://purl.org/dc/terms/modified Wed Feb 03 09:35:08 PST 2010
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(MULTISCALEITERATIVE) http://www.w3.org/2000/01/rdf-schema#label MDT with KLMI (Multiscale Iterative)
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(MULTISCALEITERATIVE) http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(MULTISCALEITERATIVE) http://purl.org/dc/elements/1.1/creator Claus Svarer
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(MULTISCALEITERATIVE) http://purl.org/dc/elements/1.1/creator Boris Gutman
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(MULTISCALEITERATIVE) http://www.opmw.org/ontology/hasNativeSystemTemplate http://wiki.loni.usc.edu/twiki/bin/view/CCB/SIGPNS_Summer2009_BG_CS_2
http://www.opmw.org/export/resource/WorkflowTemplate/SSMAWORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/SSMAWORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/SSMAWORKFLOW http://purl.org/dc/terms/modified Wed Apr 07 10:46:04 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/SSMAWORKFLOW http://www.w3.org/2000/01/rdf-schema#label SSMA Workflow
http://www.opmw.org/export/resource/WorkflowTemplate/SSMAWORKFLOW http://www.w3.org/2000/01/rdf-schema#comment skull stripping meta algorithm
http://www.opmw.org/export/resource/WorkflowTemplate/SSMAWORKFLOW http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/SSMAWORKFLOW http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/SSMAWORKFLOW http://www.opmw.org/ontology/hasDocumentation skull stripping meta algorithm
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(MULTISCALESYMMETRIC) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(MULTISCALESYMMETRIC) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(MULTISCALESYMMETRIC) http://purl.org/dc/terms/modified Wed Feb 03 09:35:35 PST 2010
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(MULTISCALESYMMETRIC) http://www.w3.org/2000/01/rdf-schema#label MDT with KLMI (Multiscale Symmetric)
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(MULTISCALESYMMETRIC) http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(MULTISCALESYMMETRIC) http://purl.org/dc/elements/1.1/creator Claus Svarer
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(MULTISCALESYMMETRIC) http://purl.org/dc/elements/1.1/creator Boris Gutman
http://www.opmw.org/export/resource/WorkflowTemplate/MDTWITHKLMI(MULTISCALESYMMETRIC) http://www.opmw.org/ontology/hasNativeSystemTemplate http://wiki.loni.usc.edu/twiki/bin/view/CCB/SIGPNS_Summer2009_BG_CS_2
http://www.opmw.org/export/resource/WorkflowTemplate/DIRECTHIPPOCAMPALMAPPING http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/DIRECTHIPPOCAMPALMAPPING http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/DIRECTHIPPOCAMPALMAPPING http://purl.org/dc/terms/modified Fri Feb 18 12:58:25 PST 2011
http://www.opmw.org/export/resource/WorkflowTemplate/DIRECTHIPPOCAMPALMAPPING http://www.w3.org/2000/01/rdf-schema#label Direct Hippocampal Mapping
http://www.opmw.org/export/resource/WorkflowTemplate/DIRECTHIPPOCAMPALMAPPING http://www.w3.org/2000/01/rdf-schema#comment The workflow takes volumetric masks of hippocampi from two groups, generates surfaces from each mask, and maps these surfaces to a hippocampal atlas. It also computes thickness and displacement feature on the surfaces and evaluates the statistical significance of the differences between the two groups with respect to these measurements.
http://www.opmw.org/export/resource/WorkflowTemplate/DIRECTHIPPOCAMPALMAPPING http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/DIRECTHIPPOCAMPALMAPPING http://purl.org/dc/elements/1.1/creator Yonggang Shi
http://www.opmw.org/export/resource/WorkflowTemplate/DIRECTHIPPOCAMPALMAPPING http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/DIRECTHIPPOCAMPALMAPPING http://www.opmw.org/ontology/hasDocumentation The workflow takes volumetric masks of hippocampi from two groups, generates surfaces from each mask, and maps these surfaces to a hippocampal atlas. It also computes thickness and displacement feature on the surfaces and evaluates the statistical significance of the differences between the two groups with respect to these measurements.
http://www.opmw.org/export/resource/WorkflowTemplate/DIRECTHIPPOCAMPALMAPPING http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/DirectHippoMapping
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELRSIWORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELRSIWORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELRSIWORKFLOW http://purl.org/dc/terms/modified Thu Jun 02 15:59:10 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELRSIWORKFLOW http://www.w3.org/2000/01/rdf-schema#label GAMMA ELRSI Workflow
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELRSIWORKFLOW http://www.w3.org/2000/01/rdf-schema#comment The Graphical-Model-based Multivariate Analysis (GAMMA) workflow enables Bayesian data-mining and analysis of high-dimensional data. Specific applications include neuroimaging data analysis, primarily lesion-based studies, functional MR-based studies, and morphometric studies.
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELRSIWORKFLOW http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELRSIWORKFLOW http://purl.org/dc/elements/1.1/creator Sam Hobel
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELRSIWORKFLOW http://www.opmw.org/ontology/versionNumber 1.1
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELRSIWORKFLOW http://www.opmw.org/ontology/hasDocumentation The Graphical-Model-based Multivariate Analysis (GAMMA) workflow enables Bayesian data-mining and analysis of high-dimensional data. Specific applications include neuroimaging data analysis, primarily lesion-based studies, functional MR-based studies, and morphometric studies.
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELRSIWORKFLOW http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_GAMMA
http://www.opmw.org/export/resource/WorkflowTemplate/CORTICALTHICKNESSWITHSVPASEG http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/CORTICALTHICKNESSWITHSVPASEG http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/CORTICALTHICKNESSWITHSVPASEG http://purl.org/dc/terms/modified Fri Apr 09 16:53:54 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/CORTICALTHICKNESSWITHSVPASEG http://www.w3.org/2000/01/rdf-schema#label Cortical Thickness with SVPASEG
http://www.opmw.org/export/resource/WorkflowTemplate/CORTICALTHICKNESSWITHSVPASEG http://www.w3.org/2000/01/rdf-schema#comment This workflow takes raw brain volumes along with corresponding whole-brain masks. In order to label the tissue types, the workflow uses the SVPASEG tool. It also generates the Left and Right cortical surfaces using FreeSurfer's ReconAll tool, which is resampled to an octahedral triangulation using LONI's Octahedral Resample module. Finally, it estimates the cortical thickness at each vertex on the cortical surfaces and maps these GM-thickness values on each vertex. The results may be viewed using ShapeViewer.
http://www.opmw.org/export/resource/WorkflowTemplate/CORTICALTHICKNESSWITHSVPASEG http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/CORTICALTHICKNESSWITHSVPASEG http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/CORTICALTHICKNESSWITHSVPASEG http://www.opmw.org/ontology/hasDocumentation This workflow takes raw brain volumes along with corresponding whole-brain masks. In order to label the tissue types, the workflow uses the SVPASEG tool. It also generates the Left and Right cortical surfaces using FreeSurfer's ReconAll tool, which is resampled to an octahedral triangulation using LONI's Octahedral Resample module. Finally, it estimates the cortical thickness at each vertex on the cortical surfaces and maps these GM-thickness values on each vertex. The results may be viewed using ShapeViewer.
http://www.opmw.org/export/resource/WorkflowTemplate/CORTICALTHICKNESSWITHSVPASEG http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_CorticalThickness
http://www.opmw.org/export/resource/WorkflowTemplate/WAVELETTRANSFORM&WAVELETSHRINKAGE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/WAVELETTRANSFORM&WAVELETSHRINKAGE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/WAVELETTRANSFORM&WAVELETSHRINKAGE http://purl.org/dc/terms/modified Thu Apr 03 15:40:33 PDT 2008
http://www.opmw.org/export/resource/WorkflowTemplate/WAVELETTRANSFORM&WAVELETSHRINKAGE http://www.w3.org/2000/01/rdf-schema#label Wavelet Transform & Wavelet Shrinkage
http://www.opmw.org/export/resource/WorkflowTemplate/WAVELETTRANSFORM&WAVELETSHRINKAGE http://www.w3.org/2000/01/rdf-schema#comment Forward and inverse wavelet transform and wavelet thresholding schemes.
http://www.opmw.org/export/resource/WorkflowTemplate/WAVELETTRANSFORM&WAVELETSHRINKAGE http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/WAVELETTRANSFORM&WAVELETSHRINKAGE http://www.opmw.org/ontology/versionNumber 2.0
http://www.opmw.org/export/resource/WorkflowTemplate/WAVELETTRANSFORM&WAVELETSHRINKAGE http://www.opmw.org/ontology/hasDocumentation Forward and inverse wavelet transform and wavelet thresholding schemes.
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPONE) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPONE) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPONE) http://purl.org/dc/terms/modified Fri Mar 08 14:58:26 PST 2013
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPONE) http://www.w3.org/2000/01/rdf-schema#label Global Shape Analysis - Two Groups (Step One)
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPONE) http://www.w3.org/2000/01/rdf-schema#comment Compute global shape measures in a set of 56 ROIs. Compare these measurements across three groups.
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPONE) http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPONE) http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPONE) http://www.opmw.org/ontology/hasDocumentation Compute global shape measures in a set of 56 ROIs. Compare these measurements across three groups.
http://www.opmw.org/export/resource/WorkflowTemplate/GLOBALSHAPEANALYSIS-TWOGROUPS(STEPONE) http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_GSA
http://www.opmw.org/export/resource/WorkflowTemplate/GATK_QC_STEPII_MOD1 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/GATK_QC_STEPII_MOD1 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/GATK_QC_STEPII_MOD1 http://purl.org/dc/terms/modified Wed Apr 06 15:59:39 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/GATK_QC_STEPII_MOD1 http://www.w3.org/2000/01/rdf-schema#label GATK_QC_StepII_Mod1
http://www.opmw.org/export/resource/WorkflowTemplate/GATK_QC_STEPII_MOD1 http://www.w3.org/2000/01/rdf-schema#comment Step II Sequence Analysis Protocol Outline
http://www.opmw.org/export/resource/WorkflowTemplate/GATK_QC_STEPII_MOD1 http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/GATK_QC_STEPII_MOD1 http://purl.org/dc/elements/1.1/creator Federica Torri
http://www.opmw.org/export/resource/WorkflowTemplate/GATK_QC_STEPII_MOD1 http://purl.org/dc/elements/1.1/creator Fabio Macciardi
http://www.opmw.org/export/resource/WorkflowTemplate/GATK_QC_STEPII_MOD1 http://purl.org/dc/elements/1.1/creator Sam Hobel
http://www.opmw.org/export/resource/WorkflowTemplate/GATK_QC_STEPII_MOD1 http://purl.org/dc/elements/1.1/creator Alex Genco
http://www.opmw.org/export/resource/WorkflowTemplate/GATK_QC_STEPII_MOD1 http://purl.org/dc/elements/1.1/creator Alen Zamanyan
http://www.opmw.org/export/resource/WorkflowTemplate/GATK_QC_STEPII_MOD1 http://purl.org/dc/elements/1.1/creator Ivo D Dinov
http://www.opmw.org/export/resource/WorkflowTemplate/GATK_QC_STEPII_MOD1 http://www.opmw.org/ontology/hasDocumentation Step II Sequence Analysis Protocol Outline
http://www.opmw.org/export/resource/WorkflowTemplate/GATK_QC_STEPII_MOD1 http://www.opmw.org/ontology/hasNativeSystemTemplate http://wiki.loni.usc.edu/twiki/bin/view/CCB/PipelineWorkflows_BioinfoGATK
http://www.opmw.org/export/resource/WorkflowTemplate/DTIANALYSIS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/DTIANALYSIS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/DTIANALYSIS http://purl.org/dc/terms/modified Tue Jun 15 10:37:12 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/DTIANALYSIS http://www.w3.org/2000/01/rdf-schema#label DTI Analysis
http://www.opmw.org/export/resource/WorkflowTemplate/DTIANALYSIS http://www.w3.org/2000/01/rdf-schema#comment DTI analysis, a collection of tools to estimate the tensor, tensor-derived scalar metrics (MD, FA, etc.), regression statistics to evaluate the fit of the tensor model at each voxel, and streamline tractography.
http://www.opmw.org/export/resource/WorkflowTemplate/DTIANALYSIS http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/DTIANALYSIS http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/DTIANALYSIS http://www.opmw.org/ontology/hasDocumentation DTI analysis, a collection of tools to estimate the tensor, tensor-derived scalar metrics (MD, FA, etc.), regression statistics to evaluate the fit of the tensor model at each voxel, and streamline tractography.
http://www.opmw.org/export/resource/WorkflowTemplate/DTIANALYSIS http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/Main/KristiClark
http://www.opmw.org/export/resource/WorkflowTemplate/DTIEDDYMOTIONDATAWITHTWOREPEATS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/DTIEDDYMOTIONDATAWITHTWOREPEATS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/DTIEDDYMOTIONDATAWITHTWOREPEATS http://purl.org/dc/terms/modified Tue Jun 15 10:35:31 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/DTIEDDYMOTIONDATAWITHTWOREPEATS http://www.w3.org/2000/01/rdf-schema#label DTI eddy motion data with two repeats
http://www.opmw.org/export/resource/WorkflowTemplate/DTIEDDYMOTIONDATAWITHTWOREPEATS http://www.w3.org/2000/01/rdf-schema#comment Correct for eddy current induced distortions & motion artifacts using data with two repeats
http://www.opmw.org/export/resource/WorkflowTemplate/DTIEDDYMOTIONDATAWITHTWOREPEATS http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/DTIEDDYMOTIONDATAWITHTWOREPEATS http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/DTIEDDYMOTIONDATAWITHTWOREPEATS http://www.opmw.org/ontology/hasDocumentation Correct for eddy current induced distortions & motion artifacts using data with two repeats
http://www.opmw.org/export/resource/WorkflowTemplate/DTIEDDYMOTIONDATAWITHTWOREPEATS http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/Main/KristiClark
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-STUDYMODULE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-STUDYMODULE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-STUDYMODULE http://purl.org/dc/terms/modified Thu May 19 15:15:23 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-STUDYMODULE http://www.w3.org/2000/01/rdf-schema#label dirac-workflow-studymodule
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-STUDYMODULE http://www.w3.org/2000/01/rdf-schema#comment A basic workflow demonstrating the hierarchy of DIRAC modules and common processing tasks as well as the use of the LONI Pipeline study module for describing DWI data sets.
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-STUDYMODULE http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-STUDYMODULE http://purl.org/dc/elements/1.1/creator Vishal Patel
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-STUDYMODULE http://www.opmw.org/ontology/versionNumber 2.2.0
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-STUDYMODULE http://www.opmw.org/ontology/hasDocumentation A basic workflow demonstrating the hierarchy of DIRAC modules and common processing tasks as well as the use of the LONI Pipeline study module for describing DWI data sets.
http://www.opmw.org/export/resource/WorkflowTemplate/DIRAC-WORKFLOW-STUDYMODULE http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/~vpatel
http://www.opmw.org/export/resource/WorkflowTemplate/ROBEXNOREFIN http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/ROBEXNOREFIN http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/ROBEXNOREFIN http://purl.org/dc/terms/modified Tue Mar 29 08:53:47 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/ROBEXNOREFIN http://www.w3.org/2000/01/rdf-schema#label ROBEXnoRefin
http://www.opmw.org/export/resource/WorkflowTemplate/ROBEXNOREFIN http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/ROBEXNOREFIN http://www.opmw.org/ontology/hasNativeSystemTemplate http://wiki.loni.usc.edu/twiki/bin/view/CCB/PipelineWorkflows_ROBEX
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGRSIWORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGRSIWORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGRSIWORKFLOW http://purl.org/dc/terms/modified Thu Jun 02 15:27:56 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGRSIWORKFLOW http://www.w3.org/2000/01/rdf-schema#label GAMMA AlgRSI Workflow
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGRSIWORKFLOW http://www.w3.org/2000/01/rdf-schema#comment The Graphical-Model-based Multivariate Analysis (GAMMA) workflow enables Bayesian data-mining and analysis of high-dimensional data. Specific applications include neuroimaging data analysis, primarily lesion-based studies, functional MR-based studies, and morphometric studies.
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGRSIWORKFLOW http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGRSIWORKFLOW http://purl.org/dc/elements/1.1/creator Sam Hobel
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGRSIWORKFLOW http://www.opmw.org/ontology/versionNumber 1.1
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGRSIWORKFLOW http://www.opmw.org/ontology/hasDocumentation The Graphical-Model-based Multivariate Analysis (GAMMA) workflow enables Bayesian data-mining and analysis of high-dimensional data. Specific applications include neuroimaging data analysis, primarily lesion-based studies, functional MR-based studies, and morphometric studies.
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAALGRSIWORKFLOW http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_GAMMA
http://www.opmw.org/export/resource/WorkflowTemplate/FIRSTLEVELGLM http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/FIRSTLEVELGLM http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/FIRSTLEVELGLM http://purl.org/dc/terms/modified Thu May 26 10:06:49 EDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/FIRSTLEVELGLM http://www.w3.org/2000/01/rdf-schema#label First Level GLM
http://www.opmw.org/export/resource/WorkflowTemplate/FIRSTLEVELGLM http://www.w3.org/2000/01/rdf-schema#comment First Level_GLM : In this process, the General Linear Modeling is applied to the functional data.
http://www.opmw.org/export/resource/WorkflowTemplate/FIRSTLEVELGLM http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/FIRSTLEVELGLM http://www.opmw.org/ontology/versionNumber 1.1
http://www.opmw.org/export/resource/WorkflowTemplate/FIRSTLEVELGLM http://www.opmw.org/ontology/hasDocumentation First Level_GLM : In this process, the General Linear Modeling is applied to the functional data.
http://www.opmw.org/export/resource/WorkflowTemplate/FIRSTLEVELGLM http://www.opmw.org/ontology/hasNativeSystemTemplate http://wiki.loni.usc.edu/twiki/bin/view/CCB/PipelineWorkflows_ASL_Workflow
http://www.opmw.org/export/resource/WorkflowTemplate/EMBOSSMATCHER http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/EMBOSSMATCHER http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/EMBOSSMATCHER http://purl.org/dc/terms/modified Wed Jul 13 18:13:36 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/EMBOSSMATCHER http://www.w3.org/2000/01/rdf-schema#label EMBOSS Matcher
http://www.opmw.org/export/resource/WorkflowTemplate/EMBOSSMATCHER http://www.w3.org/2000/01/rdf-schema#comment This page contains a number of bioinformatics workflows based on the advanced EMBOSS informatics package. This page describes as Pipeline modules several bioinformatics tools from the EMBOSS suite and demonstrates the construction of a couple of integrated pipeline workflows (end-to-end bioinformatics solutions via the LONI Pipeline).
http://www.opmw.org/export/resource/WorkflowTemplate/EMBOSSMATCHER http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/EMBOSSMATCHER http://purl.org/dc/elements/1.1/creator Ivo Dinov
http://www.opmw.org/export/resource/WorkflowTemplate/EMBOSSMATCHER http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/EMBOSSMATCHER http://www.opmw.org/ontology/hasDocumentation This page contains a number of bioinformatics workflows based on the advanced EMBOSS informatics package. This page describes as Pipeline modules several bioinformatics tools from the EMBOSS suite and demonstrates the construction of a couple of integrated pipeline workflows (end-to-end bioinformatics solutions via the LONI Pipeline).
http://www.opmw.org/export/resource/WorkflowTemplate/EMBOSSMATCHER http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_BioinfoEMBOSS
http://www.opmw.org/export/resource/WorkflowTemplate/GWASSIMPUTE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/GWASSIMPUTE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/GWASSIMPUTE http://purl.org/dc/terms/modified Fri Nov 05 12:48:36 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/GWASSIMPUTE http://www.w3.org/2000/01/rdf-schema#label GWASS Impute
http://www.opmw.org/export/resource/WorkflowTemplate/GWASSIMPUTE http://www.w3.org/2000/01/rdf-schema#comment Genome-wide Association Study Software (GWASS) package provides genomics tools facilitating the analysis of genome-wide association studies. IMPUTE2 is a GWASS program for phasing observed genotypes and imputing missing genotypes. It includes basic and advanced functions.
http://www.opmw.org/export/resource/WorkflowTemplate/GWASSIMPUTE http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/GWASSIMPUTE http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/GWASSIMPUTE http://www.opmw.org/ontology/hasDocumentation Genome-wide Association Study Software (GWASS) package provides genomics tools facilitating the analysis of genome-wide association studies. IMPUTE2 is a GWASS program for phasing observed genotypes and imputing missing genotypes. It includes basic and advanced functions.
http://www.opmw.org/export/resource/WorkflowTemplate/GWASSIMPUTE http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_BioinfoGWASS
http://www.opmw.org/export/resource/WorkflowTemplate/FREESURFERAUTOSURFACEEXTRACTOR http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/FREESURFERAUTOSURFACEEXTRACTOR http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/FREESURFERAUTOSURFACEEXTRACTOR http://purl.org/dc/terms/modified Fri Jan 22 17:45:53 PST 2010
http://www.opmw.org/export/resource/WorkflowTemplate/FREESURFERAUTOSURFACEEXTRACTOR http://www.w3.org/2000/01/rdf-schema#label FreeSurfer Auto Surface Extractor
http://www.opmw.org/export/resource/WorkflowTemplate/FREESURFERAUTOSURFACEEXTRACTOR http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/BATWING http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/BATWING http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/BATWING http://purl.org/dc/terms/modified Fri Apr 22 14:48:33 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/BATWING http://www.w3.org/2000/01/rdf-schema#label BATWING
http://www.opmw.org/export/resource/WorkflowTemplate/BATWING http://www.w3.org/2000/01/rdf-schema#comment Batwing reads in multi-locus haplotype data, and model and prior distri- bution specifications, and uses a Markov chain Monte Carlo (MCMC) method based on coalescent theory to generate approximate random samples from the posterior distributions of parameters such as mutation rates, effective population sizes and growth rates, and times of population splitting events. It also generates approximate posterior samples of the entire genealogical tree underly- ing the sample, including the tree height, which corresponds to the Time since the Most Recent Common Ancestor (TMRCA). Batwing does not model the effects of either recombination or selection, and hence implicitly assumes that these effects are negligible. Note also that Batwing is intended for within- species data, and not between-species data for which many phylogenetic soft- ware packages are available. Batwing is a direct descendant of MICSAT, described in Wilson & Balding (Genetics 150, pp 499-510, 1998). The principal differences are: (1) in addition to the stepwise mutation model (SMM) for microsatellite loci, there are mu- tation models for unique event polymorphisms (UEP); and (2) the population demography is extended from constant size, random mating, populations (the standard coalescent model), to include population growth and subdivision.
http://www.opmw.org/export/resource/WorkflowTemplate/BATWING http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/BATWING http://purl.org/dc/elements/1.1/creator Alex Genco
http://www.opmw.org/export/resource/WorkflowTemplate/BATWING http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/BATWING http://www.opmw.org/ontology/hasDocumentation Batwing reads in multi-locus haplotype data, and model and prior distri- bution specifications, and uses a Markov chain Monte Carlo (MCMC) method based on coalescent theory to generate approximate random samples from the posterior distributions of parameters such as mutation rates, effective population sizes and growth rates, and times of population splitting events. It also generates approximate posterior samples of the entire genealogical tree underly- ing the sample, including the tree height, which corresponds to the Time since the Most Recent Common Ancestor (TMRCA). Batwing does not model the effects of either recombination or selection, and hence implicitly assumes that these effects are negligible. Note also that Batwing is intended for within- species data, and not between-species data for which many phylogenetic soft- ware packages are available. Batwing is a direct descendant of MICSAT, described in Wilson & Balding (Genetics 150, pp 499-510, 1998). The principal differences are: (1) in addition to the stepwise mutation model (SMM) for microsatellite loci, there are mu- tation models for unique event polymorphisms (UEP); and (2) the population demography is extended from constant size, random mating, populations (the standard coalescent model), to include population growth and subdivision.
http://www.opmw.org/export/resource/WorkflowTemplate/BATWING http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/LONI/Pipeline_GenomicsInformatics_BATWING
http://www.opmw.org/export/resource/WorkflowTemplate/SVPASEG(TISSUECLASSIFICATION) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/SVPASEG(TISSUECLASSIFICATION) http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/SVPASEG(TISSUECLASSIFICATION) http://purl.org/dc/terms/modified Fri Dec 18 15:25:19 PST 2009
http://www.opmw.org/export/resource/WorkflowTemplate/SVPASEG(TISSUECLASSIFICATION) http://www.w3.org/2000/01/rdf-schema#label SVPASEG (Tissue Classification)
http://www.opmw.org/export/resource/WorkflowTemplate/SVPASEG(TISSUECLASSIFICATION) http://www.w3.org/2000/01/rdf-schema#comment This workflow segments a raw unskull stripped image into different tissue types.
http://www.opmw.org/export/resource/WorkflowTemplate/SVPASEG(TISSUECLASSIFICATION) http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/SVPASEG(TISSUECLASSIFICATION) http://www.opmw.org/ontology/versionNumber V2.0
http://www.opmw.org/export/resource/WorkflowTemplate/SVPASEG(TISSUECLASSIFICATION) http://www.opmw.org/ontology/hasDocumentation This workflow segments a raw unskull stripped image into different tissue types.
http://www.opmw.org/export/resource/WorkflowTemplate/SVPASEG(TISSUECLASSIFICATION) http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_SVPASEG
http://www.opmw.org/export/resource/WorkflowTemplate/PREPROCESS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/PREPROCESS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/PREPROCESS http://purl.org/dc/terms/modified Thu Jul 28 09:03:21 EDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/PREPROCESS http://www.w3.org/2000/01/rdf-schema#label Pre Process
http://www.opmw.org/export/resource/WorkflowTemplate/PREPROCESS http://www.w3.org/2000/01/rdf-schema#comment Pre_Process_Original: In this process, the input required are T1W3D and Stories_Task/Sentences_Task
http://www.opmw.org/export/resource/WorkflowTemplate/PREPROCESS http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/PREPROCESS http://purl.org/dc/elements/1.1/creator Nick Felicelli
http://www.opmw.org/export/resource/WorkflowTemplate/PREPROCESS http://www.opmw.org/ontology/versionNumber 1.3
http://www.opmw.org/export/resource/WorkflowTemplate/PREPROCESS http://www.opmw.org/ontology/hasDocumentation Pre_Process_Original: In this process, the input required are T1W3D and Stories_Task/Sentences_Task
http://www.opmw.org/export/resource/WorkflowTemplate/PREPROCESS http://www.opmw.org/ontology/hasNativeSystemTemplate http://wiki.loni.usc.edu/twiki/bin/view/CCB/PipelineWorkflows_ASL_Workflow
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELWORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELWORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELWORKFLOW http://purl.org/dc/terms/modified Thu Jun 02 15:59:22 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELWORKFLOW http://www.w3.org/2000/01/rdf-schema#label GAMMA EL Workflow
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELWORKFLOW http://www.w3.org/2000/01/rdf-schema#comment The Graphical-Model-based Multivariate Analysis (GAMMA) workflow enables Bayesian data-mining and analysis of high-dimensional data. Specific applications include neuroimaging data analysis, primarily lesion-based studies, functional MR-based studies, and morphometric studies.
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELWORKFLOW http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELWORKFLOW http://purl.org/dc/elements/1.1/creator Sam Hobel
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELWORKFLOW http://www.opmw.org/ontology/versionNumber 1.1
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELWORKFLOW http://www.opmw.org/ontology/hasDocumentation The Graphical-Model-based Multivariate Analysis (GAMMA) workflow enables Bayesian data-mining and analysis of high-dimensional data. Specific applications include neuroimaging data analysis, primarily lesion-based studies, functional MR-based studies, and morphometric studies.
http://www.opmw.org/export/resource/WorkflowTemplate/GAMMAELWORKFLOW http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_GAMMA
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITEMNCSKULLSTRIPPING http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITEMNCSKULLSTRIPPING http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITEMNCSKULLSTRIPPING http://purl.org/dc/terms/modified Wed May 19 12:10:09 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITEMNCSKULLSTRIPPING http://www.w3.org/2000/01/rdf-schema#label BrainSuite MNC Skullstripping
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINSUITEMNCSKULLSTRIPPING http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/PLUTO_EXAMPLE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/PLUTO_EXAMPLE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/PLUTO_EXAMPLE http://purl.org/dc/terms/modified Wed Apr 18 17:40:34 PDT 2012
http://www.opmw.org/export/resource/WorkflowTemplate/PLUTO_EXAMPLE http://www.w3.org/2000/01/rdf-schema#label Pluto_example
http://www.opmw.org/export/resource/WorkflowTemplate/PLUTO_EXAMPLE http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/MRFASTINDEXINGMAPPING http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/MRFASTINDEXINGMAPPING http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/MRFASTINDEXINGMAPPING http://purl.org/dc/terms/modified Thu Mar 17 09:24:36 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/MRFASTINDEXINGMAPPING http://www.w3.org/2000/01/rdf-schema#label mrFAST Indexing Mapping
http://www.opmw.org/export/resource/WorkflowTemplate/MRFASTINDEXINGMAPPING http://www.w3.org/2000/01/rdf-schema#comment Overview This page contains a number of bioinformatics workflows based on the mrFAST sequence analysis package. This page describes Pipeline bioinformatics modules from the mrFAST suite. Problems addressed by mrFAST workflows Detailed Workflow Usage & Specifications mrFAST (micro-read Fast Alignment Search Tool) is mapper designed to map short reads to reference genome with a special emphasis on the discovery of structural variation and segmental duplications. mrFAST maps short reads with respect to user defined error threshold, including indels up to 6 bp. This manual, describes how to choose the parameters and tune mrFAST with respect to the library settings. mrFAST is designed to find 'all' mappings for a given set of reads, however it can return one "best" map location if the relevant parameter is invoked.
http://www.opmw.org/export/resource/WorkflowTemplate/MRFASTINDEXINGMAPPING http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/MRFASTINDEXINGMAPPING http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/MRFASTINDEXINGMAPPING http://www.opmw.org/ontology/hasDocumentation Overview This page contains a number of bioinformatics workflows based on the mrFAST sequence analysis package. This page describes Pipeline bioinformatics modules from the mrFAST suite. Problems addressed by mrFAST workflows Detailed Workflow Usage & Specifications mrFAST (micro-read Fast Alignment Search Tool) is mapper designed to map short reads to reference genome with a special emphasis on the discovery of structural variation and segmental duplications. mrFAST maps short reads with respect to user defined error threshold, including indels up to 6 bp. This manual, describes how to choose the parameters and tune mrFAST with respect to the library settings. mrFAST is designed to find 'all' mappings for a given set of reads, however it can return one "best" map location if the relevant parameter is invoked.
http://www.opmw.org/export/resource/WorkflowTemplate/MRFASTINDEXINGMAPPING http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_BioinfoMRFAST
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSERTRAINING http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSERTRAINING http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSERTRAINING http://purl.org/dc/terms/modified Wed Dec 08 09:25:32 PST 2010
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSERTRAINING http://www.w3.org/2000/01/rdf-schema#label BrainParser Training
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSERTRAINING http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSERTRAINING http://purl.org/dc/elements/1.1/creator Alex Genco
http://www.opmw.org/export/resource/WorkflowTemplate/BRAINPARSERTRAINING http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/MIGRATE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/MIGRATE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/MIGRATE http://purl.org/dc/terms/modified Fri Apr 22 14:54:44 PDT 2011
http://www.opmw.org/export/resource/WorkflowTemplate/MIGRATE http://www.w3.org/2000/01/rdf-schema#label Migrate
http://www.opmw.org/export/resource/WorkflowTemplate/MIGRATE http://www.w3.org/2000/01/rdf-schema#comment Migrate estimates effective population sizes and past migration rates between n population assuming a migration matrix model with asymmetric migration rates and different subpopulation sizes. Migrate uses maximum likelihood or Bayesian inference to jointly estimate all parameters.
http://www.opmw.org/export/resource/WorkflowTemplate/MIGRATE http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/MIGRATE http://purl.org/dc/elements/1.1/creator Alex Genco
http://www.opmw.org/export/resource/WorkflowTemplate/MIGRATE http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/MIGRATE http://www.opmw.org/ontology/hasDocumentation Migrate estimates effective population sizes and past migration rates between n population assuming a migration matrix model with asymmetric migration rates and different subpopulation sizes. Migrate uses maximum likelihood or Bayesian inference to jointly estimate all parameters.
http://www.opmw.org/export/resource/WorkflowTemplate/MIGRATE http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/LONI/Pipeline_GenomicsInformatics_Migrate
http://www.opmw.org/export/resource/WorkflowTemplate/BASICFMRIPREPROCESSINGSTREAMLINED http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/BASICFMRIPREPROCESSINGSTREAMLINED http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/BASICFMRIPREPROCESSINGSTREAMLINED http://purl.org/dc/terms/modified Mon Aug 17 12:21:32 PDT 2009
http://www.opmw.org/export/resource/WorkflowTemplate/BASICFMRIPREPROCESSINGSTREAMLINED http://www.w3.org/2000/01/rdf-schema#label Basic fMRI PreProcessing Streamlined
http://www.opmw.org/export/resource/WorkflowTemplate/BASICFMRIPREPROCESSINGSTREAMLINED http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/BASICFMRIPREPROCESSINGSTREAMLINED http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/BASICFMRIPREPROCESSINGSTREAMLINED http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_fMRIFEAT
http://www.opmw.org/export/resource/WorkflowTemplate/FORWARDANDINVERSEWAVELETTRANSFORM http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/FORWARDANDINVERSEWAVELETTRANSFORM http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/FORWARDANDINVERSEWAVELETTRANSFORM http://purl.org/dc/terms/modified Thu Apr 03 15:49:11 PDT 2008
http://www.opmw.org/export/resource/WorkflowTemplate/FORWARDANDINVERSEWAVELETTRANSFORM http://www.w3.org/2000/01/rdf-schema#label Forward and Inverse Wavelet Transform
http://www.opmw.org/export/resource/WorkflowTemplate/FORWARDANDINVERSEWAVELETTRANSFORM http://www.w3.org/2000/01/rdf-schema#comment Forward and inverse wavelet transform on nD hyper-volumes.
http://www.opmw.org/export/resource/WorkflowTemplate/FORWARDANDINVERSEWAVELETTRANSFORM http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/FORWARDANDINVERSEWAVELETTRANSFORM http://www.opmw.org/ontology/versionNumber 2.0
http://www.opmw.org/export/resource/WorkflowTemplate/FORWARDANDINVERSEWAVELETTRANSFORM http://www.opmw.org/ontology/hasDocumentation Forward and inverse wavelet transform on nD hyper-volumes.
http://www.opmw.org/export/resource/WorkflowTemplate/SSMAMODULE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/SSMAMODULE http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/SSMAMODULE http://purl.org/dc/terms/modified Wed Apr 07 17:57:42 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/SSMAMODULE http://www.w3.org/2000/01/rdf-schema#label SSMA Module
http://www.opmw.org/export/resource/WorkflowTemplate/SSMAMODULE http://www.w3.org/2000/01/rdf-schema#comment skull stripping meta algorithm
http://www.opmw.org/export/resource/WorkflowTemplate/SSMAMODULE http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/SSMAMODULE http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/SSMAMODULE http://www.opmw.org/ontology/hasDocumentation skull stripping meta algorithm
http://www.opmw.org/export/resource/WorkflowTemplate/DTIEDDYMOTIONCORRECTION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/DTIEDDYMOTIONCORRECTION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/DTIEDDYMOTIONCORRECTION http://purl.org/dc/terms/modified Tue Jun 15 10:31:38 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/DTIEDDYMOTIONCORRECTION http://www.w3.org/2000/01/rdf-schema#label DTI eddy motion correction
http://www.opmw.org/export/resource/WorkflowTemplate/DTIEDDYMOTIONCORRECTION http://www.w3.org/2000/01/rdf-schema#comment Correct for eddy current induced distortions & motion artifacts
http://www.opmw.org/export/resource/WorkflowTemplate/DTIEDDYMOTIONCORRECTION http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/DTIEDDYMOTIONCORRECTION http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/DTIEDDYMOTIONCORRECTION http://www.opmw.org/ontology/hasDocumentation Correct for eddy current induced distortions & motion artifacts
http://www.opmw.org/export/resource/WorkflowTemplate/DTIEDDYMOTIONCORRECTION http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/Main/KristiClark
http://www.opmw.org/export/resource/WorkflowTemplate/TBM_STEP1A_022511 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/TBM_STEP1A_022511 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/TBM_STEP1A_022511 http://purl.org/dc/terms/modified
http://www.opmw.org/export/resource/WorkflowTemplate/TBM_STEP1A_022511 http://www.w3.org/2000/01/rdf-schema#label TBM_step1a_022511
http://www.opmw.org/export/resource/WorkflowTemplate/TBM_STEP1A_022511 http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/CORRECTSLICEPRESCRIPTION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/CORRECTSLICEPRESCRIPTION http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/CORRECTSLICEPRESCRIPTION http://purl.org/dc/terms/modified Tue Jun 15 10:07:59 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/CORRECTSLICEPRESCRIPTION http://www.w3.org/2000/01/rdf-schema#label Correct Slice Prescription
http://www.opmw.org/export/resource/WorkflowTemplate/CORRECTSLICEPRESCRIPTION http://www.w3.org/2000/01/rdf-schema#comment Getting started (convert data from DICOM to analyze, correct gradient table for slice prescription, generate .diff file and/or bvals/bvecs for FSL).
http://www.opmw.org/export/resource/WorkflowTemplate/CORRECTSLICEPRESCRIPTION http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/CORRECTSLICEPRESCRIPTION http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/CORRECTSLICEPRESCRIPTION http://www.opmw.org/ontology/hasDocumentation Getting started (convert data from DICOM to analyze, correct gradient table for slice prescription, generate .diff file and/or bvals/bvecs for FSL).
http://www.opmw.org/export/resource/WorkflowTemplate/CORRECTSLICEPRESCRIPTION http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/Main/KristiClark
http://www.opmw.org/export/resource/WorkflowTemplate/TRACTOGRAPHYOPTIONS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/TRACTOGRAPHYOPTIONS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/TRACTOGRAPHYOPTIONS http://purl.org/dc/terms/modified Tue Jun 15 10:47:57 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/TRACTOGRAPHYOPTIONS http://www.w3.org/2000/01/rdf-schema#label Tractography options
http://www.opmw.org/export/resource/WorkflowTemplate/TRACTOGRAPHYOPTIONS http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/TRACTOGRAPHYOPTIONS http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/TRACTOGRAPHYOPTIONS http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/Main/KristiClark
http://www.opmw.org/export/resource/WorkflowTemplate/BLAST http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/BLAST http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/BLAST http://purl.org/dc/terms/modified Mon Aug 30 18:29:25 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/BLAST http://www.w3.org/2000/01/rdf-schema#label BLAST
http://www.opmw.org/export/resource/WorkflowTemplate/BLAST http://www.w3.org/2000/01/rdf-schema#comment This is a simple workflow demonstrating a sequence Basic Local Alignment Search Tool (BLAST).
http://www.opmw.org/export/resource/WorkflowTemplate/BLAST http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/BLAST http://purl.org/dc/elements/1.1/creator Ivo Dinov
http://www.opmw.org/export/resource/WorkflowTemplate/BLAST http://purl.org/dc/elements/1.1/creator Alen Zamanyan
http://www.opmw.org/export/resource/WorkflowTemplate/BLAST http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/BLAST http://www.opmw.org/ontology/hasDocumentation This is a simple workflow demonstrating a sequence Basic Local Alignment Search Tool (BLAST).
http://www.opmw.org/export/resource/WorkflowTemplate/BLAST http://www.opmw.org/ontology/hasNativeSystemTemplate http://wiki.loni.usc.edu/twiki/bin/view/CCB/PipelineWorkflows_BioinfoBLAST
http://www.opmw.org/export/resource/WorkflowTemplate/BLAST http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_BioinfoBLAST
http://www.opmw.org/export/resource/WorkflowTemplate/DTI_WORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/DTI_WORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/DTI_WORKFLOW http://purl.org/dc/terms/modified Thu Feb 04 12:31:59 PST 2010
http://www.opmw.org/export/resource/WorkflowTemplate/DTI_WORKFLOW http://www.w3.org/2000/01/rdf-schema#label DTI_workflow
http://www.opmw.org/export/resource/WorkflowTemplate/DTI_WORKFLOW http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/DTI_WORKFLOW http://www.opmw.org/ontology/hasNativeSystemTemplate http://www.loni.ucla.edu/twiki/bin/view/CCB/PipelineWorkflows_DTIDSI
http://www.opmw.org/export/resource/WorkflowTemplate/LONISTATISTICS-TWOGROUPS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/LONISTATISTICS-TWOGROUPS http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/LONISTATISTICS-TWOGROUPS http://purl.org/dc/terms/modified Thu Oct 21 14:30:10 PDT 2010
http://www.opmw.org/export/resource/WorkflowTemplate/LONISTATISTICS-TWOGROUPS http://www.w3.org/2000/01/rdf-schema#label LONI Statistics - Two Groups
http://www.opmw.org/export/resource/WorkflowTemplate/LONISTATISTICS-TWOGROUPS http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/LONISTATISTICS-TWOGROUPS http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/AIR-BRAINSUITEHETEROGENEOUSWORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/AIR-BRAINSUITEHETEROGENEOUSWORKFLOW http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/AIR-BRAINSUITEHETEROGENEOUSWORKFLOW http://purl.org/dc/terms/modified Thu Jun 11 13:28:50 PDT 2009
http://www.opmw.org/export/resource/WorkflowTemplate/AIR-BRAINSUITEHETEROGENEOUSWORKFLOW http://www.w3.org/2000/01/rdf-schema#label AIR-BrainSuite Heterogeneous Workflow
http://www.opmw.org/export/resource/WorkflowTemplate/AIR-BRAINSUITEHETEROGENEOUSWORKFLOW http://www.w3.org/2000/01/rdf-schema#comment This example will showcase the potential for heterogeneity of image analysis tools within a Pipeline workflow. Also, it will present an often useful approach to putting together a workflow, in that we will take parts of already existing workflows and combine them in a meaningful way to perform a new type of analysis. The steps below will further clarify this notion.
http://www.opmw.org/export/resource/WorkflowTemplate/AIR-BRAINSUITEHETEROGENEOUSWORKFLOW http://www.opmw.org/ontology/createdInWorkflowSystem http://pipeline.loni.usc.edu
http://www.opmw.org/export/resource/WorkflowTemplate/AIR-BRAINSUITEHETEROGENEOUSWORKFLOW http://purl.org/dc/elements/1.1/creator Alen Zamanyan
http://www.opmw.org/export/resource/WorkflowTemplate/AIR-BRAINSUITEHETEROGENEOUSWORKFLOW http://purl.org/dc/elements/1.1/creator Shruthi Chakrapani
http://www.opmw.org/export/resource/WorkflowTemplate/AIR-BRAINSUITEHETEROGENEOUSWORKFLOW http://www.opmw.org/ontology/versionNumber 1.0
http://www.opmw.org/export/resource/WorkflowTemplate/AIR-BRAINSUITEHETEROGENEOUSWORKFLOW http://www.opmw.org/ontology/hasDocumentation This example will showcase the potential for heterogeneity of image analysis tools within a Pipeline workflow. Also, it will present an often useful approach to putting together a workflow, in that we will take parts of already existing workflows and combine them in a meaningful way to perform a new type of analysis. The steps below will further clarify this notion.
http://www.opmw.org/export/resource/WorkflowTemplate/AIR-BRAINSUITEHETEROGENEOUSWORKFLOW http://www.opmw.org/ontology/hasNativeSystemTemplate http://pipeline.loni.ucla.edu/
http://www.opmw.org/export/resource/WorkflowTemplate/REGISTRATIONUSINGAIR http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/net/p-plan#Plan
http://www.opmw.org/export/resource/WorkflowTemplate/REGISTRATIONUSINGAIR http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.opmw.org/ontology/WorkflowTemplate
http://www.opmw.org/export/resource/WorkflowTemplate/REGISTRATIONUSINGAIR http://purl.org/dc/terms/modified Thu Jun 11 13:29:25 PDT 2009